RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 A0A1W2PQ27 194 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 A0A1W2PQ64 194 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 A0A1W2PQD8 194 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 KINO60870 393 aaKnown RBP14.5□□□□□ -0.09
PTPN6-201ENST00000318974 U2AF2P26368 475 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTPN6-201ENST00000318974 ZNF165P49910 485 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 SLFN13Q68D06 897 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 DIS3L2Q8IYB7 885 aaKnown RBP14.5□□□□□ -0.09
PTPN6-201ENST00000318974 ENGASEQ8NFI3 743 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 DCAF4Q8WV16 495 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 HOOK2Q96ED9 719 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 ARHGEF10LQ9HCE6 1279 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 SYNPO2Q9UMS6 1093 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 PPP2R3BQ9Y5P8 575 aa14.5□□□□□ -0.09
PTPN6-201ENST00000318974 CCDC96Q2M329 555 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 MYSM1Q5VVJ2 828 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 LINC00301Q8NCQ3 95 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 GMCL1P1Q8NEA9 526 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 PHF20Q9BVI0 1012 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 CPVLQ9H3G5 476 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 GOLPH3LQ9H4A5 285 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 RIOX1Q9H6W3 641 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 GPCPD1Q9NPB8 672 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 ZC3H4Q9UPT8 1303 aaKnown RBP14.49□□□□□ -0.09
PTPN6-201ENST00000318974 NBPF12Q5TAG4 269 aaPredicted RBP14.49□□□□□ -0.09
PTPN6-201ENST00000318974 DCAF15Q66K64 600 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 FSIP1Q8NA03 581 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 MRPS27Q92552 414 aaKnown RBP14.49□□□□□ -0.09
PTPN6-201ENST00000318974 SHISA4Q96DD7 197 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 RRP36Q96EU6 259 aaKnown RBP14.49□□□□□ -0.09
PTPN6-201ENST00000318974 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 FOXP1Q9H334 677 aaPredicted RBP14.49□□□□□ -0.09
PTPN6-201ENST00000318974 PCDHA7Q9UN72 937 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 PITPNM2Q9BZ72 1349 aa14.49□□□□□ -0.09
PTPN6-201ENST00000318974 PHF20L1A8MW92 1017 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 BTBD18B2RXH4 712 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 F5H6K3 240 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 RAD21O60216 631 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 ASNSP08243 561 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 SLC1A4P43007 532 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 KLRC3Q07444 240 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 STK38Q15208 465 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 STX1AQ16623 288 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 DNAJC25Q9H1X3 360 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 TTC12Q9H892 705 aaPredicted RBP14.48□□□□□ -0.09
PTPN6-201ENST00000318974 BRMS1Q9HCU9 246 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 SH3GLB2Q9NR46 395 aa14.48□□□□□ -0.09
PTPN6-201ENST00000318974 A0A1W2PRG0 241 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 VEGFAP15692 232 aaPredicted RBP14.47□□□□□ -0.09
PTPN6-201ENST00000318974 KRT2P35908 639 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 KCTD1Q719H9 257 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.47□□□□□ -0.09
PTPN6-201ENST00000318974 L3MBTL3Q96JM7 780 aaPredicted RBP14.47□□□□□ -0.09
PTPN6-201ENST00000318974 VAT1LQ9HCJ6 419 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 GINM1Q9NU53 330 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 SEC63Q9UGP8 760 aaKnown RBP14.47□□□□□ -0.09
PTPN6-201ENST00000318974 NLRP5P59047 1200 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 SF3A1Q15459 793 aaKnown RBP14.47□□□□□ -0.09
PTPN6-201ENST00000318974 HOMER1Q86YM7 354 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 NOSTRINQ8IVI9 506 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 GMCL1Q96IK5 515 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 ZNF341Q9BYN7 854 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 TMX2Q9Y320 296 aa14.47□□□□□ -0.09
PTPN6-201ENST00000318974 GLTPD2A6NH11 291 aa14.46□□□□□ -0.09
PTPN6-201ENST00000318974 SPTLC2O15270 562 aa14.46□□□□□ -0.09
PTPN6-201ENST00000318974 NDUFB10O96000 172 aa14.46□□□□□ -0.09
PTPN6-201ENST00000318974 TTBK2Q6IQ55 1244 aa14.46□□□□□ -0.09
PTPN6-201ENST00000318974 FMR1NBQ8N0W7 255 aaPredicted RBP14.46□□□□□ -0.09
PTPN6-201ENST00000318974 CCDC148Q8NFR7 591 aa14.46□□□□□ -0.09
PTPN6-201ENST00000318974 GPKOWQ92917 476 aaPredicted RBP eCLIP14.46□□□□□ -0.09
PTPN6-201ENST00000318974 ZNF830Q96NB3 372 aaPredicted RBP14.46□□□□□ -0.09
PTPN6-201ENST00000318974 PIGSQ96S52 555 aa14.46□□□□□ -0.09
PTPN6-201ENST00000318974 SH2D4AQ9H788 454 aa14.46□□□□□ -0.09
PTPN6-201ENST00000318974 BARHL2Q9NY43 387 aa14.46□□□□□ -0.09
PTPN6-201ENST00000318974 CTNND1O60716 968 aaKnown RBP14.46□□□□□ -0.1
PTPN6-201ENST00000318974 CALML3P27482 149 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 ECE1P42892 770 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 NR5A1Q13285 461 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 PRAMEF18Q5VWM3 479 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 WWC2Q6AWC2 1192 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 HEATR3Q7Z4Q2 680 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 PLA2G4DQ86XP0 818 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 FAM177A1Q8N128 213 aaPredicted RBP14.46□□□□□ -0.1
PTPN6-201ENST00000318974 ACER1Q8TDN7 264 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 OXER1Q8TDS5 423 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 DCPSQ96C86 337 aaKnown RBP14.46□□□□□ -0.1
PTPN6-201ENST00000318974 GOPCQ9HD26 462 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 ANO10Q9NW15 660 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 R3HCC1Q9Y3T6 440 aaKnown RBP14.46□□□□□ -0.1
PTPN6-201ENST00000318974 CLIC4Q9Y696 253 aa14.46□□□□□ -0.1
PTPN6-201ENST00000318974 NOLC1Q14978 699 aaKnown RBP eCLIP14.45□□□□□ -0.1
PTPN6-201ENST00000318974 ANO1Q5XXA6 986 aa14.45□□□□□ -0.1
PTPN6-201ENST00000318974 USP50Q70EL3 339 aaPredicted RBP14.45□□□□□ -0.1
PTPN6-201ENST00000318974 ADGRF4Q8IZF3 695 aa14.45□□□□□ -0.1
PTPN6-201ENST00000318974 JMJD4Q9H9V9 463 aa14.45□□□□□ -0.1
PTPN6-201ENST00000318974 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.45□□□□□ -0.1
PTPN6-201ENST00000318974 hCG_1984214I3L0E3 225 aa14.45□□□□□ -0.1
PTPN6-201ENST00000318974 STXBP3O00186 592 aa14.45□□□□□ -0.1
PTPN6-201ENST00000318974 BMP3P12645 472 aa14.45□□□□□ -0.1
PTPN6-201ENST00000318974 SLC16A2P36021 539 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms