RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 CCL23P55773 120 aa16.06■□□□□ 0.16
SYCN-201ENST00000318438 MTX1Q13505 466 aa16.06■□□□□ 0.16
SYCN-201ENST00000318438 TMEM132BQ14DG7 1078 aa16.06■□□□□ 0.16
SYCN-201ENST00000318438 FTSJ3Q8IY81 847 aaKnown RBP16.06■□□□□ 0.16
SYCN-201ENST00000318438 TMEM57Q8N5G2 664 aa16.06■□□□□ 0.16
SYCN-201ENST00000318438 EHD4Q9H223 541 aa16.06■□□□□ 0.16
SYCN-201ENST00000318438 FAM184BQ9ULE4 1060 aa16.06■□□□□ 0.16
SYCN-201ENST00000318438 ZBBXA8MT70 800 aa16.05■□□□□ 0.16
SYCN-201ENST00000318438 CD4P01730 458 aa16.05■□□□□ 0.16
SYCN-201ENST00000318438 ATP2A2P16615 1042 aaKnown RBP16.05■□□□□ 0.16
SYCN-201ENST00000318438 KCTD2Q14681 263 aa16.05■□□□□ 0.16
SYCN-201ENST00000318438 FBXL18Q96ME1 805 aa16.05■□□□□ 0.16
SYCN-201ENST00000318438 HIPK3Q9H422 1215 aa16.05■□□□□ 0.16
SYCN-201ENST00000318438 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
SYCN-201ENST00000318438 USP34Q70CQ2 3546 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 SRGAP3O43295 1099 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 ADCY6O43306 1168 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 DUSP11O75319 330 aaKnown RBP16.04■□□□□ 0.16
SYCN-201ENST00000318438 SLC25A27O95847 323 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 GNAI2P04899 355 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 UQCRFS1P1P0C7P4 283 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 CST5P28325 142 aaPredicted RBP16.04■□□□□ 0.16
SYCN-201ENST00000318438 USP5P45974 858 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 SPICE1Q8N0Z3 855 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 MIGA1Q8NAN2 632 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 DIS3Q9Y2L1 958 aaKnown RBP16.04■□□□□ 0.16
SYCN-201ENST00000318438 CACNA1AO00555 2505 aa16.04■□□□□ 0.16
SYCN-201ENST00000318438 MPHOSPH10O00566 681 aaKnown RBP16.03■□□□□ 0.16
SYCN-201ENST00000318438 SNAI1O95863 264 aaPredicted RBP16.03■□□□□ 0.16
SYCN-201ENST00000318438 CYP2E1P05181 493 aaPredicted RBP16.03■□□□□ 0.16
SYCN-201ENST00000318438 PLCD1P51178 756 aa16.03■□□□□ 0.16
SYCN-201ENST00000318438 TMEM67Q5HYA8 995 aa16.03■□□□□ 0.16
SYCN-201ENST00000318438 PCSK9Q8NBP7 692 aaKnown RBP16.03■□□□□ 0.16
SYCN-201ENST00000318438 ARNTL2Q8WYA1 636 aa16.03■□□□□ 0.16
SYCN-201ENST00000318438 WNT8AQ9H1J5 351 aa16.03■□□□□ 0.16
SYCN-201ENST00000318438 CFAP54Q96N23 3096 aa16.02■□□□□ 0.16
SYCN-201ENST00000318438 ARHGEF15O94989 841 aa16.02■□□□□ 0.16
SYCN-201ENST00000318438 CYP7A1P22680 504 aa16.02■□□□□ 0.16
SYCN-201ENST00000318438 GNASQ5JWF2 1037 aa16.02■□□□□ 0.16
SYCN-201ENST00000318438 VWCEQ96DN2 955 aa16.02■□□□□ 0.16
SYCN-201ENST00000318438 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.16
SYCN-201ENST00000318438 RLBP1P12271 317 aa16.01■□□□□ 0.15
SYCN-201ENST00000318438 EVX2Q03828 476 aa16.01■□□□□ 0.15
SYCN-201ENST00000318438 CSPP1Q1MSJ5 1256 aa16.01■□□□□ 0.15
SYCN-201ENST00000318438 TTC6Q86TZ1 520 aa16.01■□□□□ 0.15
SYCN-201ENST00000318438 RIOX2Q8IUF8 465 aa16.01■□□□□ 0.15
SYCN-201ENST00000318438 CLEC10AQ8IUN9 316 aa16.01■□□□□ 0.15
SYCN-201ENST00000318438 ITPRIPQ8IWB1 547 aa16.01■□□□□ 0.15
SYCN-201ENST00000318438 GJD3Q8N144 294 aa16.01■□□□□ 0.15
SYCN-201ENST00000318438 NOC4LQ9BVI4 516 aaKnown RBP16.01■□□□□ 0.15
SYCN-201ENST00000318438 MYH1P12882 1939 aa16.01■□□□□ 0.15
SYCN-201ENST00000318438 ZNFX1Q9P2E3 1918 aaKnown RBP16.01■□□□□ 0.15
SYCN-201ENST00000318438 GJA9P57773 515 aa16■□□□□ 0.15
SYCN-201ENST00000318438 GRB10Q13322 594 aa16■□□□□ 0.15
SYCN-201ENST00000318438 TTLL4Q14679 1199 aa16■□□□□ 0.15
SYCN-201ENST00000318438 TTC39AQ5SRH9 613 aa16■□□□□ 0.15
SYCN-201ENST00000318438 SCLYQ96I15 445 aa16■□□□□ 0.15
SYCN-201ENST00000318438 TRPV6Q9H1D0 765 aa16■□□□□ 0.15
SYCN-201ENST00000318438 UPF3AQ9H1J1 476 aaKnown RBP16■□□□□ 0.15
SYCN-201ENST00000318438 SPC25Q9HBM1 224 aa16■□□□□ 0.15
SYCN-201ENST00000318438 FBXO28Q9NVF7 368 aa16■□□□□ 0.15
SYCN-201ENST00000318438 CTAGE5O15320 804 aa15.99■□□□□ 0.15
SYCN-201ENST00000318438 SSTR3P32745 418 aaPredicted RBP15.99■□□□□ 0.15
SYCN-201ENST00000318438 BEX3Q00994 111 aa15.99■□□□□ 0.15
SYCN-201ENST00000318438 TAP1Q03518 808 aa15.99■□□□□ 0.15
SYCN-201ENST00000318438 ACVR2BQ13705 512 aa15.99■□□□□ 0.15
SYCN-201ENST00000318438 SPRED2Q7Z698 418 aa15.99■□□□□ 0.15
SYCN-201ENST00000318438 PHOX2BQ99453 314 aa15.99■□□□□ 0.15
SYCN-201ENST00000318438 PNMA6EA0A0J9YXQ4 647 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 MS4A1P11836 297 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 STAT3P40763 770 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 ZAP70P43403 619 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 GABPAQ06546 454 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 CCDC144BQ3MJ40 725 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 CXCL17Q6UXB2 119 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 SIAH1Q8IUQ4 282 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 FAM178BQ8IXR5 827 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 RPUSD2Q8IZ73 545 aaKnown RBP15.98■□□□□ 0.15
SYCN-201ENST00000318438 MSL3Q8N5Y2 521 aaKnown RBP15.98■□□□□ 0.15
SYCN-201ENST00000318438 SLC43A3Q8NBI5 491 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 ANKS1AQ92625 1134 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 BRWD1Q9NSI6 2320 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 RCAN3Q9UKA8 241 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 ADAMTS5Q9UNA0 930 aa15.98■□□□□ 0.15
SYCN-201ENST00000318438 B4GALT4O60513 344 aa15.97■□□□□ 0.15
SYCN-201ENST00000318438 LPXNO60711 386 aa15.97■□□□□ 0.15
SYCN-201ENST00000318438 ALADP13716 330 aa15.97■□□□□ 0.15
SYCN-201ENST00000318438 G3BP1Q13283 466 aaKnown RBP eCLIP15.97■□□□□ 0.15
SYCN-201ENST00000318438 MAMDC4Q6UXC1 1216 aa15.97■□□□□ 0.15
SYCN-201ENST00000318438 VCPKMTQ9H867 229 aa15.97■□□□□ 0.15
SYCN-201ENST00000318438 ZNF214Q9UL59 606 aaPredicted RBP15.97■□□□□ 0.15
SYCN-201ENST00000318438 GRIN2DO15399 1336 aa15.96■□□□□ 0.15
SYCN-201ENST00000318438 TRIOO75962 3097 aa15.96■□□□□ 0.15
SYCN-201ENST00000318438 VWA5AO00534 786 aa15.96■□□□□ 0.15
SYCN-201ENST00000318438 IDH1O75874 414 aaKnown RBP15.96■□□□□ 0.15
SYCN-201ENST00000318438 POLR3DP05423 398 aaPredicted RBP15.96■□□□□ 0.15
SYCN-201ENST00000318438 ITGA7Q13683 1181 aa15.96■□□□□ 0.15
SYCN-201ENST00000318438 PANK1Q8TE04 598 aa15.96■□□□□ 0.15
SYCN-201ENST00000318438 AGBL1Q96MI9 1066 aa15.96■□□□□ 0.15
SYCN-201ENST00000318438 DBNDD2Q9BQY9 259 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms