RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 SMARCA1P28370 1054 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 ADD1P35611 737 aaKnown RBP14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 STAT2P52630 851 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 ST3GAL1Q11201 340 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 SCRN1Q12765 414 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 COG2Q14746 738 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 NTRK3Q16288 839 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 NBPF11Q86T75 865 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 CHURC1Q8WUH1 139 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 GTF3C6Q969F1 213 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 SLF1Q9BQI6 1058 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 LZTS2Q9BRK4 669 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 NCOA5Q9HCD5 579 aaKnown RBP14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 SH2B1Q9NRF2 756 aaPredicted RBP14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 PPP1R9AQ9ULJ8 1098 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 NAP1L2Q9ULW6 460 aaPredicted RBP14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 ADAMTS5Q9UNA0 930 aa14.73□□□□□ -0.05
CHMP2A-201ENST00000312547 CCDC196A0A1B0GTZ2 297 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 SPDYE16A6NNV3 312 aaPredicted RBP14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 CYTH3O43739 400 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 FLOT1O75955 427 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 OSBPP22059 807 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 DSG3P32926 999 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 SLC16A2P36021 539 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 CCT2P78371 535 aaKnown RBP14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 STK3Q13188 491 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 SYDE2Q5VT97 1194 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 POTEEQ6S8J3 1075 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 LBX2Q6XYB7 198 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 SRBD1Q8N5C6 995 aaKnown RBP14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 PRPF38AQ8NAV1 312 aaKnown RBP14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 MTMR8Q96EF0 704 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 TMX3Q96JJ7 454 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 P2RX7Q99572 595 aaKnown RBP14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 SPZ1Q9BXG8 430 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 UBA5Q9GZZ9 404 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 SLKQ9H2G2 1235 aaPredicted RBP14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 CPVLQ9H3G5 476 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 RIOX1Q9H6W3 641 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 PNMA3Q9UL41 463 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 PRR12Q9ULL5 1215 aa14.72□□□□□ -0.05
CHMP2A-201ENST00000312547 ADGRA2Q96PE1 1338 aa14.71□□□□□ -0.05
CHMP2A-201ENST00000312547 FOXN1O15353 648 aa14.71□□□□□ -0.05
CHMP2A-201ENST00000312547 CYP2C8P10632 490 aa14.71□□□□□ -0.05
CHMP2A-201ENST00000312547 IRX3P78415 501 aaPredicted RBP14.71□□□□□ -0.05
CHMP2A-201ENST00000312547 NECAB1Q8N987 351 aa14.71□□□□□ -0.05
CHMP2A-201ENST00000312547 REPS2Q8NFH8 660 aa14.71□□□□□ -0.05
CHMP2A-201ENST00000312547 ATG4CQ96DT6 458 aa14.71□□□□□ -0.05
CHMP2A-201ENST00000312547 PARK7Q99497 189 aaKnown RBP14.71□□□□□ -0.05
CHMP2A-201ENST00000312547 HOXC10Q9NYD6 342 aa14.71□□□□□ -0.05
CHMP2A-201ENST00000312547 CTDNEP1O95476 244 aa14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 ALDH1A1P00352 501 aa14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 IFNAR1P17181 557 aa14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 HERVK_113P62684 666 aa14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 OTUD7BQ6GQQ9 843 aa14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 ADGRF4Q8IZF3 695 aa14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 CMTR1Q8N1G2 835 aaKnown RBP14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 KIFC2Q96AC6 838 aa14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 RANBP17Q9H2T7 1088 aaKnown RBP14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 JMJD4Q9H9V9 463 aa14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 TSHZ2Q9NRE2 1034 aa14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 ISY1Q9ULR0 285 aaKnown RBP14.7□□□□□ -0.06
CHMP2A-201ENST00000312547 CNTNAP5Q8WYK1 1306 aa14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 RLFQ13129 1914 aa14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 K7ELQ4 463 aaPredicted RBP14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 VWA5AO00534 786 aa14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 DHX16O60231 1041 aaKnown RBP14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 FDX1P10109 184 aa14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 IKQ13123 557 aaPredicted RBP14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 CUL4AQ13619 759 aa14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 GTF3C2Q8WUA4 911 aaPredicted RBP14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 CFHR5Q9BXR6 569 aa14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 SLC38A10Q9HBR0 1119 aa14.69□□□□□ -0.06
CHMP2A-201ENST00000312547 ATP2A1O14983 1001 aa14.68□□□□□ -0.06
CHMP2A-201ENST00000312547 CA12O43570 354 aa14.68□□□□□ -0.06
CHMP2A-201ENST00000312547 CNMDO75829 334 aa14.68□□□□□ -0.06
CHMP2A-201ENST00000312547 GCLCP48506 637 aaPredicted RBP14.68□□□□□ -0.06
CHMP2A-201ENST00000312547 TAF1CQ15572 869 aaPredicted RBP14.68□□□□□ -0.06
CHMP2A-201ENST00000312547 CCDC83Q8IWF9 413 aa14.68□□□□□ -0.06
CHMP2A-201ENST00000312547 MB21D1Q8N884 522 aa14.68□□□□□ -0.06
CHMP2A-201ENST00000312547 RBPJLQ9UBG7 517 aa14.68□□□□□ -0.06
CHMP2A-201ENST00000312547 RABGAP1Q9Y3P9 1069 aa14.68□□□□□ -0.06
CHMP2A-201ENST00000312547 ZNF536O15090 1300 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 CPLX1O14810 134 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 ZBTB5O15062 677 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 TLR2O60603 784 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 ZBED4O75132 1171 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 OAZ1P54368 228 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 CRHR2Q13324 411 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 TMEM132BQ14DG7 1078 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 CDC37Q16543 378 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 CPLX2Q6PUV4 134 aaKnown RBP14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 HSCBQ8IWL3 235 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 CCDC82Q8N4S0 544 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 NSUN7Q8NE18 718 aaKnown RBP14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 SMCR8Q8TEV9 937 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 PIGSQ96S52 555 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 LLPHQ9BRT6 129 aaKnown RBP14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 RNF26Q9BY78 433 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 ZFYVE28Q9HCC9 887 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms