RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 VPS37DQ86XT2 251 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 MSL3Q8N5Y2 521 aaKnown RBP10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 CDC5LQ99459 802 aaKnown RBP10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 ZNF652Q9Y2D9 606 aa10.72□□□□□ -0.69
RBFOX1-201ENST00000311745 MYO1FO00160 1098 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 WNT7AO00755 349 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 IFNAR1P17181 557 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 SLC39A14Q15043 492 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 ANO1Q5XXA6 986 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 MICU3Q86XE3 530 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 STK11IPQ8N1F8 1099 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 BICD2Q8TD16 824 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 ZKSCAN4Q969J2 545 aaPredicted RBP10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 BICD1Q96G01 975 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 NAPBQ9H115 298 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 BLOC1S6Q9UL45 172 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 KCNB1Q14721 858 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 TMEM67Q5HYA8 995 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 BICDL1Q6ZP65 573 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 CMTR1Q8N1G2 835 aaKnown RBP10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 FSIP1Q8NA03 581 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 ALG1Q9BT22 464 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 ZCWPW1Q9H0M4 648 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 PCDHGA4Q9Y5G9 962 aa10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.71□□□□□ -0.69
RBFOX1-201ENST00000311745 ZBTB43O43298 467 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 TOM1O60784 492 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 URI1O94763 535 aaPredicted RBP10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 GNAT2P19087 354 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 CYP7A1P22680 504 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 ZNF75DP51815 510 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 GRIN1Q05586 938 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 E2F5Q15329 346 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 EARS2Q5JPH6 523 aaKnown RBP10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 SARM1Q6SZW1 724 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 DRAXINQ8NBI3 349 aaPredicted RBP10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 MTRQ99707 1265 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 MTA3Q9BTC8 594 aa10.71□□□□□ -0.7
RBFOX1-201ENST00000311745 SIPA1L1O43166 1804 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 PPP1R12BO60237 982 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 CAVIN2O95810 425 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 CCT5P48643 541 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 MDM2Q00987 491 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 MECOMQ03112 1051 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 NCAPHQ15003 741 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 TRIM42Q8IWZ5 723 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 ENAHQ8N8S7 591 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 CNNM3Q8NE01 707 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 BRIP1Q9BX63 1249 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 TMX4Q9H1E5 349 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 GREB1LQ9C091 1923 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 MYH1P12882 1939 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 A0A0G2JS52 829 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 CHUKO15111 745 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 N4BP1O75113 896 aaKnown RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 SSBP05455 408 aaKnown RBP eCLIP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 LAMB3Q13751 1172 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 HSP90B2PQ58FF3 399 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 CC2D1AQ6P1N0 951 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 FAM177A1Q8N128 213 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 CRACR2BQ8N4Y2 399 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 PHC3Q8NDX5 983 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 MRPS27Q92552 414 aaKnown RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 TNFRSF25Q93038 417 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 TACO1Q9BSH4 297 aaKnown RBP10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 CARD6Q9BX69 1037 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 FAM107BQ9H098 131 aa10.7□□□□□ -0.7
RBFOX1-201ENST00000311745 GNPATO15228 680 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 SPTLC2O15270 562 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 PPFIA4O75335 1185 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 PFKFB1P16118 471 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 MAGEA8P43361 318 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 FOXP4Q8IVH2 680 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 B4GALNT2Q8NHY0 566 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 OXER1Q8TDS5 423 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 IRX2Q9BZI1 471 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 TSGA10Q9BZW7 698 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 YIPF3Q9GZM5 350 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 MAGEB6P1A0A0J9YX57 407 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 MMP1P03956 469 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 PRDX5P30044 214 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 MFSD6Q6ZSS7 791 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 KRT23Q9C075 422 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 CNNM2Q9H8M5 875 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 TFCP2L1Q9NZI6 479 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 FAM169AQ9Y6X4 670 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 GOLGA8AA7E2F4 631 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 BMP6P22004 513 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 CMA1P23946 247 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 ZNF165P49910 485 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 RAB27AP51159 221 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 SCNN1BP51168 640 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 RCAN1P53805 252 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 RPS8P62241 208 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 CCDC15Q0P6D6 951 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 SLC35G1Q2M3R5 365 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 DPCR1Q3MIW9 517 aa10.69□□□□□ -0.7
RBFOX1-201ENST00000311745 RESP18Q5W5W9 173 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms