RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 TMEM132BQ14DG7 1078 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 TMEM67Q5HYA8 995 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 SNRNP48Q6IEG0 339 aaKnown RBP23.2■■□□□ 1.3
VEGFB-201ENST00000309422 CPXCR1Q8N123 301 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 PXYLP1Q8TE99 480 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 APBA2Q99767 749 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 TMEM106CQ9BVX2 250 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 GABRQQ9UN88 632 aa23.2■■□□□ 1.3
VEGFB-201ENST00000309422 FRMPD2Q68DX3 1309 aaPredicted RBP23.2■■□□□ 1.3
VEGFB-201ENST00000309422 SLC15A5A6NIM6 579 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 CAP1Q01518 475 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 KCTD2Q14681 263 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 NECTIN1Q15223 517 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 ASPRV1Q53RT3 343 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 RIOX2Q8IUF8 465 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 ANKS1AQ92625 1134 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 ARMC5Q96C12 935 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 SLC38A10Q9HBR0 1119 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 GPCPD1Q9NPB8 672 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 ADAMTS5Q9UNA0 930 aa23.19■■□□□ 1.3
VEGFB-201ENST00000309422 DHX16O60231 1041 aaKnown RBP23.18■■□□□ 1.3
VEGFB-201ENST00000309422 PARP1P09874 1014 aaKnown RBP23.18■■□□□ 1.3
VEGFB-201ENST00000309422 FCER1AP12319 257 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 CYP2B6P20813 491 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 IFFO2Q5TF58 517 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 SYDE2Q5VT97 1194 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 NFXL1Q6ZNB6 911 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 CATIPQ7Z7H3 387 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 DPP9Q86TI2 863 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 SH3TC2Q8TF17 1288 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 MTA3Q9BTC8 594 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 FBXO40Q9UH90 709 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 A0A0G2JMZ2 1700 aa23.18■■□□□ 1.3
VEGFB-201ENST00000309422 EPB41L2O43491 1005 aaKnown RBP23.17■■□□□ 1.3
VEGFB-201ENST00000309422 HMGB1P09429 215 aaKnown RBP23.17■■□□□ 1.3
VEGFB-201ENST00000309422 PTPREP23469 700 aa23.17■■□□□ 1.3
VEGFB-201ENST00000309422 FGD1P98174 961 aa23.17■■□□□ 1.3
VEGFB-201ENST00000309422 ZNF543Q08ER8 600 aa23.17■■□□□ 1.3
VEGFB-201ENST00000309422 MAP2K5Q13163 448 aa23.17■■□□□ 1.3
VEGFB-201ENST00000309422 CYB5R4Q7L1T6 521 aa23.17■■□□□ 1.3
VEGFB-201ENST00000309422 TMEM87BQ96K49 555 aa23.17■■□□□ 1.3
VEGFB-201ENST00000309422 MMP19Q99542 508 aa23.17■■□□□ 1.3
VEGFB-201ENST00000309422 PRC1O43663 620 aa23.16■■□□□ 1.3
VEGFB-201ENST00000309422 HMGCRP04035 888 aa23.16■■□□□ 1.3
VEGFB-201ENST00000309422 GRB14Q14449 540 aa23.16■■□□□ 1.3
VEGFB-201ENST00000309422 STOX1Q6ZVD7 989 aa23.16■■□□□ 1.3
VEGFB-201ENST00000309422 MB21D2Q8IYB1 491 aaPredicted RBP23.16■■□□□ 1.3
VEGFB-201ENST00000309422 ABRAQ8N0Z2 381 aa23.16■■□□□ 1.3
VEGFB-201ENST00000309422 TMTC2Q8N394 836 aa23.16■■□□□ 1.3
VEGFB-201ENST00000309422 NEK1Q96PY6 1258 aa23.16■■□□□ 1.3
VEGFB-201ENST00000309422 ZNF214Q9UL59 606 aaPredicted RBP23.16■■□□□ 1.3
VEGFB-201ENST00000309422 PRR12Q9ULL5 1215 aa23.16■■□□□ 1.3
VEGFB-201ENST00000309422 CCDC69A6NI79 296 aa23.15■■□□□ 1.3
VEGFB-201ENST00000309422 ATP2A1O14983 1001 aa23.15■■□□□ 1.3
VEGFB-201ENST00000309422 XRCC5P13010 732 aaKnown RBP23.15■■□□□ 1.3
VEGFB-201ENST00000309422 CCDC174Q6PII3 467 aa23.15■■□□□ 1.3
VEGFB-201ENST00000309422 ZNF333Q96JL9 665 aa23.15■■□□□ 1.3
VEGFB-201ENST00000309422 RAVER2Q9HCJ3 691 aaKnown RBP23.15■■□□□ 1.3
VEGFB-201ENST00000309422 ZSWIM8A7E2V4 1837 aa23.15■■□□□ 1.3
VEGFB-201ENST00000309422 SNHG28P0DPA3 235 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 ELNP15502 786 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 ADORA2AP29274 412 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 TKFCQ3LXA3 575 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 MORN1Q5T089 497 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 SYNE3Q6ZMZ3 975 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 CHST3Q7LGC8 479 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 CHST13Q8NET6 341 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 CCPG1Q9ULG6 757 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 MGAMO43451 1857 aa23.14■■□□□ 1.3
VEGFB-201ENST00000309422 MYCP01106 439 aaPredicted RBP23.14■■□□□ 1.29
VEGFB-201ENST00000309422 INHAP05111 366 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 SLC16A2P36021 539 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 MFSD14CQ5VZR4 134 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 POTEEQ6S8J3 1075 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 BTNL9Q6UXG8 535 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 RASGRP2Q7LDG7 609 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 REPS2Q8NFH8 660 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 DDX11Q96FC9 970 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 GJD2Q9UKL4 321 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 TAF6LQ9Y6J9 622 aa23.14■■□□□ 1.29
VEGFB-201ENST00000309422 PSMA5P28066 241 aa23.13■■□□□ 1.29
VEGFB-201ENST00000309422 KIF5BP33176 963 aa23.13■■□□□ 1.29
VEGFB-201ENST00000309422 SEC23AQ15436 765 aa23.13■■□□□ 1.29
VEGFB-201ENST00000309422 ANKRD35Q8N283 1001 aa23.13■■□□□ 1.29
VEGFB-201ENST00000309422 CTCFLQ8NI51 663 aaPredicted RBP23.13■■□□□ 1.29
VEGFB-201ENST00000309422 ACAD9Q9H845 621 aa23.13■■□□□ 1.29
VEGFB-201ENST00000309422 HOMER2Q9NSB8 354 aa23.13■■□□□ 1.29
VEGFB-201ENST00000309422 GOLGA8HP0CJ92 632 aa23.12■■□□□ 1.29
VEGFB-201ENST00000309422 SOX10P56693 466 aa23.12■■□□□ 1.29
VEGFB-201ENST00000309422 NKX2-3Q8TAU0 364 aa23.12■■□□□ 1.29
VEGFB-201ENST00000309422 NUP133Q8WUM0 1156 aa23.12■■□□□ 1.29
VEGFB-201ENST00000309422 RANBP17Q9H2T7 1088 aaKnown RBP23.12■■□□□ 1.29
VEGFB-201ENST00000309422 WDR19Q8NEZ3 1342 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 DDAH1O94760 285 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 ICAM1P05362 532 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 CALM1P0DP23 149 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 CALM2P0DP24 149 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 CALM3P0DP25 149 aa23.11■■□□□ 1.29
VEGFB-201ENST00000309422 ALAS1P13196 640 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms