RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 EPS15P42566 896 aa9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 SHC4Q6S5L8 630 aa9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 MAD2L2Q9UI95 211 aa9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 CEP131Q9UPN4 1083 aa9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 PCDHA5Q9Y5H7 936 aa9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 KRT18P05783 430 aaKnown RBP9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 CALML3P27482 149 aa9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 NBPF12Q5TAG4 269 aaPredicted RBP9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 SH3BP5LQ7L8J4 393 aa9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 MYOZ2Q9NPC6 264 aa9.78□□□□□ -0.84
LCLAT1-201ENST00000309052 SPDYE2BA6NHP3 402 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 SPDYE6P0CI01 402 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 ALAS1P13196 640 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 CACNB1Q02641 598 aaPredicted RBP9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 CYP4A11Q02928 519 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 CCDC178Q5BJE1 867 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 HHIPL2Q6UWX4 724 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 DTHD1Q6ZMT9 781 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 MAEAQ7L5Y9 396 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 CCDC148Q8NFR7 591 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 CCDC34Q96HJ3 373 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 ZDHHC15Q96MV8 337 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 PSTPIP2Q9H939 334 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 KANSL2Q9H9L4 492 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 TBC1D7Q9P0N9 293 aa9.77□□□□□ -0.84
LCLAT1-201ENST00000309052 PEX10O60683 326 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 SH2D3AQ9BRG2 576 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 FSD2A1L4K1 749 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 LETM1O95202 739 aaPredicted RBP9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 YEATS4O95619 227 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 NDUFB10O96000 172 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 STAT6P42226 847 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 JAG1P78504 1218 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 PFKFB3Q16875 520 aaPredicted RBP9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 FAM177A1Q8N128 213 aaPredicted RBP9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 TCEAL9Q9UHQ7 104 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 KLRG2A4D1S0 409 aaPredicted RBP9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 FLOT1O75955 427 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 GNA11P29992 359 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 FAM200AQ8TCP9 573 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 WRNIP1Q96S55 665 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 DEFB129Q9H1M3 183 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 DNAJC18Q9H819 358 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 ANO10Q9NW15 660 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 GGA3Q9NZ52 723 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 SAMM50Q9Y512 469 aa9.77□□□□□ -0.85
LCLAT1-201ENST00000309052 SALL1Q9NSC2 1324 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 ESPNB1AK53 854 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 TDP2O95551 362 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 PDIA4P13667 645 aaKnown RBP9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 ADCY7P51828 1080 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 NONOQ15233 471 aaKnown RBP eCLIP9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 QRICH1Q2TAL8 776 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 CLEC17AQ6ZS10 378 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 TBC1D5Q92609 795 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 SPDYE3A6NKU9 549 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 NFKBIEO00221 500 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 EVCP57679 992 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 PRR16Q569H4 304 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 SMARCE1Q969G3 411 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 PCMTD1Q96MG8 357 aaPredicted RBP9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 TMEM60Q9H2L4 133 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 POTEMA6NI47 508 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 TNIP1Q15025 636 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 CDC37Q16543 378 aaPredicted RBP9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 ARHGEF10LQ9HCE6 1279 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 MKRN1Q9UHC7 482 aaKnown RBP9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 NRBP1Q9UHY1 535 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 BMP3P12645 472 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 KCNA3P22001 575 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 CCDC173Q0VFZ6 552 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 SHISA4Q96DD7 197 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 DHX36Q9H2U1 1008 aaKnown RBP9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 HACL1Q9UJ83 578 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 HOOK1Q9UJC3 728 aaKnown RBP9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 CEP350Q5VT06 3117 aa9.76□□□□□ -0.85
LCLAT1-201ENST00000309052 TNRC6CQ9HCJ0 1690 aaKnown RBP9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 A0A1W2PRG0 241 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 MYCLP12524 364 aaPredicted RBP9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 GRM4Q14833 912 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 STX1AQ16623 288 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 MOB2Q70IA6 237 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 CCDC186Q7Z3E2 898 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 CCDC12Q8WUD4 166 aaPredicted RBP9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.853e-6■■■■□ 19.3
LCLAT1-201ENST00000309052 TMX1Q9H3N1 280 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 ZHX2Q9Y6X8 837 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 GOLGA8FQ08AF8 430 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 GOLGA8DPQ0D2H9 430 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 KIF4BQ2VIQ3 1234 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 NAT10Q9H0A0 1025 aaKnown RBP9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 FOXP1Q9H334 677 aaPredicted RBP9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 TRMT1Q9NXH9 659 aaKnown RBP9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 GAKO14976 1311 aa9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 PCP11498 1178 aaKnown RBP9.75□□□□□ -0.85
LCLAT1-201ENST00000309052 TPM4P67936 248 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms