RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 GOLGA1Q92805 767 aa12□□□□□ -0.49
MUC4-201ENST00000308466 TSG101Q99816 390 aa12□□□□□ -0.49
MUC4-201ENST00000308466 ACBD3Q9H3P7 528 aa12□□□□□ -0.49
MUC4-201ENST00000308466 BCL9O00512 1426 aa12□□□□□ -0.49
MUC4-201ENST00000308466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
MUC4-201ENST00000308466 KCNJ18B7U540 433 aa12□□□□□ -0.49
MUC4-201ENST00000308466 SCNN1DP51172 638 aa12□□□□□ -0.49
MUC4-201ENST00000308466 KCNJ12Q14500 433 aa12□□□□□ -0.49
MUC4-201ENST00000308466 RBM17Q96I25 401 aaKnown RBP12□□□□□ -0.49
MUC4-201ENST00000308466 MAP3K14Q99558 947 aa12□□□□□ -0.49
MUC4-201ENST00000308466 LRRC37A3O60309 1634 aa12□□□□□ -0.49
MUC4-201ENST00000308466 CTAGE15A4D2H0 777 aa12□□□□□ -0.49
MUC4-201ENST00000308466 MYO1BO43795 1136 aa12□□□□□ -0.49
MUC4-201ENST00000308466 GTPBP6O43824 516 aaPredicted RBP12□□□□□ -0.49
MUC4-201ENST00000308466 CTAGE8P0CG41 777 aa12□□□□□ -0.49
MUC4-201ENST00000308466 CUL4BQ13620 913 aa12□□□□□ -0.49
MUC4-201ENST00000308466 SF3B3Q15393 1217 aaKnown RBP12□□□□□ -0.49
MUC4-201ENST00000308466 CTAGE6Q86UF2 777 aa12□□□□□ -0.49
MUC4-201ENST00000308466 CTAGE4Q8IX94 777 aa12□□□□□ -0.49
MUC4-201ENST00000308466 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
MUC4-201ENST00000308466 GDAQ9Y2T3 454 aa12□□□□□ -0.49
MUC4-201ENST00000308466 PP2D1A8MPX8 630 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 ARID5AQ03989 594 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 FAM114A1Q8IWE2 563 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 REXO1Q8N1G1 1221 aaKnown RBP11.99□□□□□ -0.49
MUC4-201ENST00000308466 CCDC43Q96MW1 224 aaKnown RBP11.99□□□□□ -0.49
MUC4-201ENST00000308466 NOC4LQ9BVI4 516 aaKnown RBP11.99□□□□□ -0.49
MUC4-201ENST00000308466 EFCC1Q9HA90 598 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 DOK7Q18PE1 504 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 CCDC122Q5T0U0 273 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 ICE2Q659A1 982 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 TXNRD3Q86VQ6 643 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 TCEAL9Q9UHQ7 104 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 H0YHG0 523 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 CYLC1P35663 651 aaPredicted RBP11.99□□□□□ -0.49
MUC4-201ENST00000308466 TCERG1LQ5VWI1 586 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 SV2BQ7L1I2 683 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 TXLNBQ8N3L3 684 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
MUC4-201ENST00000308466 CCDC42Q96M95 316 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 PCDHA4Q9UN74 947 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 CTDP1Q9Y5B0 961 aaPredicted RBP11.99□□□□□ -0.49
MUC4-201ENST00000308466 RIC1Q4ADV7 1423 aa11.99□□□□□ -0.49
MUC4-201ENST00000308466 NCAPHQ15003 741 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 FBXO38Q6PIJ6 1188 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 KRT25Q7Z3Z0 450 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 NBPF11Q86T75 865 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.98□□□□□ -0.49
MUC4-201ENST00000308466 HPSEQ9Y251 543 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 XDHP47989 1333 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 MACROD2A1Z1Q3 448 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 USO1O60763 962 aaKnown RBP11.98□□□□□ -0.49
MUC4-201ENST00000308466 EIF3JO75822 258 aaKnown RBP11.98□□□□□ -0.49
MUC4-201ENST00000308466 FGFR1OPO95684 399 aaKnown RBP11.98□□□□□ -0.49
MUC4-201ENST00000308466 TROAPQ12815 778 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 PPP2R5AQ15172 486 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 TOGARAM2Q6ZUX3 1019 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 TMTC1Q8IUR5 882 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 RUFY1Q96T51 708 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 TBC1D7Q9P0N9 293 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 TTF2Q9UNY4 1162 aaKnown RBP11.98□□□□□ -0.49
MUC4-201ENST00000308466 LEMD3Q9Y2U8 911 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 COPB1P53618 953 aaKnown RBP11.98□□□□□ -0.49
MUC4-201ENST00000308466 MTF1Q14872 753 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 ZSCAN26Q16670 478 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 RIOK1Q9BRS2 568 aaKnown RBP11.98□□□□□ -0.49
MUC4-201ENST00000308466 EPC1Q9H2F5 836 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 LMO7Q8WWI1 1683 aa11.98□□□□□ -0.49
MUC4-201ENST00000308466 PHACTR2O75167 634 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 LONP1P36776 959 aaKnown RBP11.97□□□□□ -0.49
MUC4-201ENST00000308466 CHMP4BP1P59074 171 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 PFKFB3Q16875 520 aaPredicted RBP11.97□□□□□ -0.49
MUC4-201ENST00000308466 CYP26C1Q6V0L0 522 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 GIMAP7Q8NHV1 300 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 SNX29Q8TEQ0 813 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 MTA3Q9BTC8 594 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 IRX2Q9BZI1 471 aaPredicted RBP11.97□□□□□ -0.49
MUC4-201ENST00000308466 JRKLQ9Y4A0 524 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 BICDL2A1A5D9 508 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 TRAPPC10P48553 1259 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 NFIXQ14938 502 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 EARS2Q5JPH6 523 aaKnown RBP11.97□□□□□ -0.49
MUC4-201ENST00000308466 DPP8Q6V1X1 898 aaPredicted RBP11.97□□□□□ -0.49
MUC4-201ENST00000308466 COA7Q96BR5 231 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 PIGSQ96S52 555 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 SLC39A2Q9NP94 309 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 DDX41Q9UJV9 622 aaKnown RBP11.97□□□□□ -0.49
MUC4-201ENST00000308466 KDM3BQ7LBC6 1761 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 SERPINB2P05120 415 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 CALRP27797 417 aaKnown RBP11.97□□□□□ -0.49
MUC4-201ENST00000308466 CALCRLQ16602 461 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 TMED8Q6PL24 325 aaPredicted RBP11.97□□□□□ -0.49
MUC4-201ENST00000308466 CEP112Q8N8E3 955 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 ACRBPQ8NEB7 543 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 TMEM47Q9BQJ4 181 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 PHF20Q9BVI0 1012 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 USP40Q9NVE5 1235 aa11.97□□□□□ -0.49
MUC4-201ENST00000308466 MYO1CO00159 1063 aa11.96□□□□□ -0.49
MUC4-201ENST00000308466 OR52Z1P0C646 297 aa11.96□□□□□ -0.49
MUC4-201ENST00000308466 EVX2Q03828 476 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms