RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 STX10O60499 249 aa16.4■□□□□ 0.22
PTPN9-201ENST00000306726 RASGRF1Q13972 1273 aa16.4■□□□□ 0.22
PTPN9-201ENST00000306726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.4■□□□□ 0.22
PTPN9-201ENST00000306726 EHD2Q9NZN4 543 aa16.4■□□□□ 0.22
PTPN9-201ENST00000306726 NTSR2O95665 410 aa16.4■□□□□ 0.22
PTPN9-201ENST00000306726 C2orf54Q08AI8 447 aa16.4■□□□□ 0.22
PTPN9-201ENST00000306726 DYMQ7RTS9 669 aa16.4■□□□□ 0.22
PTPN9-201ENST00000306726 SRGAP1Q7Z6B7 1085 aa16.4■□□□□ 0.22
PTPN9-201ENST00000306726 LUC7L2Q9Y383 392 aaKnown RBP16.4■□□□□ 0.22
PTPN9-201ENST00000306726 DUSP10Q9Y6W6 482 aa16.4■□□□□ 0.22
PTPN9-201ENST00000306726 PHLPP2Q6ZVD8 1323 aa16.39■□□□□ 0.22
PTPN9-201ENST00000306726 VEGFAP15692 232 aaPredicted RBP16.39■□□□□ 0.21
PTPN9-201ENST00000306726 TOB1P50616 345 aaPredicted RBP16.39■□□□□ 0.21
PTPN9-201ENST00000306726 EIF6P56537 245 aaKnown RBP16.39■□□□□ 0.21
PTPN9-201ENST00000306726 RILPL1Q5EBL4 403 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 SND1Q7KZF4 910 aaKnown RBP eCLIP16.39■□□□□ 0.21
PTPN9-201ENST00000306726 KRT26Q7Z3Y9 468 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 IQCA1Q86XH1 822 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 LY9Q9HBG7 655 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 CEP131Q9UPN4 1083 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 WNT7AO00755 349 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 CASP8Q14790 479 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 EHD4Q9H223 541 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 MRFAP1Q9Y605 127 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 ADGRG1Q9Y653 693 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 USP17L12C9JPN9 530 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 USP17L21D6R901 530 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 BUB1O43683 1085 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 AKR1B10O60218 316 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 KLK7P49862 253 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 DEFB132Q7Z7B7 95 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 CDC23Q9UJX2 597 aa16.39■□□□□ 0.21
PTPN9-201ENST00000306726 KRT2P35908 639 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 IGHMBP2P38935 993 aaKnown RBP16.38■□□□□ 0.21
PTPN9-201ENST00000306726 TTC38Q5R3I4 469 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 COL23A1Q86Y22 540 aaPredicted RBP16.38■□□□□ 0.21
PTPN9-201ENST00000306726 SRP68Q9UHB9 627 aaKnown RBP16.38■□□□□ 0.21
PTPN9-201ENST00000306726 CCDC194A0A1B0GVG4 234 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 B4DLN1 442 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 HGSO14964 777 aaPredicted RBP16.38■□□□□ 0.21
PTPN9-201ENST00000306726 GTF2A1P52655 376 aaPredicted RBP16.38■□□□□ 0.21
PTPN9-201ENST00000306726 TBC1D9BQ66K14 1250 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
PTPN9-201ENST00000306726 TYW1BQ6NUM6 668 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 CEP112Q8N8E3 955 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 HSD3B7Q9H2F3 369 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 ACBD3Q9H3P7 528 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 NLRC4Q9NPP4 1024 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 CCDC196A0A1B0GTZ2 297 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 MMP1P03956 469 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 CCT5P48643 541 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 ASIC1P78348 528 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 PTPAQ15257 358 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 SUSD4Q5VX71 490 aa16.38■□□□□ 0.21
PTPN9-201ENST00000306726 FEZ2Q9UHY8 353 aaPredicted RBP16.38■□□□□ 0.21
PTPN9-201ENST00000306726 A0A087X0B3 334 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 GOLGA6L9A6NEM1 432 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 HPDP32754 393 aaPredicted RBP16.37■□□□□ 0.21
PTPN9-201ENST00000306726 GUCY2FP51841 1108 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 TBC1D8BQ0IIM8 1120 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 KRT31Q15323 416 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 RABGGTAQ92696 567 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
PTPN9-201ENST00000306726 SAP30BPQ9UHR5 308 aaKnown RBP16.37■□□□□ 0.21
PTPN9-201ENST00000306726 RNF225M0QZC1 329 aaPredicted RBP16.37■□□□□ 0.21
PTPN9-201ENST00000306726 TM4SF1P30408 202 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 HLTFQ14527 1009 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPN9-201ENST00000306726 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 CCDC70Q6NSX1 233 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 PAGE5Q96GU1 130 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 FUT8Q9BYC5 575 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 EPB41L4AQ9HCS5 686 aaPredicted RBP16.37■□□□□ 0.21
PTPN9-201ENST00000306726 MYO6Q9UM54 1294 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 KCNJ18B7U540 433 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 BACH1O14867 736 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 FOXP2O15409 715 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 MNAT1P51948 309 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 KCNJ12Q14500 433 aa16.37■□□□□ 0.21
PTPN9-201ENST00000306726 ESYT3A0FGR9 886 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 DEXIO95424 95 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 PLCD1P51178 756 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 CTSWP56202 376 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 MAP3K9P80192 1104 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 MORC3Q14149 939 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 NFIXQ14938 502 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 ESR2Q92731 530 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 RNF40O75150 1001 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 CYP2D6P10635 497 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 TTF1Q15361 905 aaPredicted RBP16.36■□□□□ 0.21
PTPN9-201ENST00000306726 PDE8BO95263 885 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 CSF1RP07333 972 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 IL17RAQ96F46 866 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 TMEM87BQ96K49 555 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 NBPF3Q9H094 633 aa16.36■□□□□ 0.21
PTPN9-201ENST00000306726 LLGL1Q15334 1064 aa16.35■□□□□ 0.21
PTPN9-201ENST00000306726 SPA17Q15506 151 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms