RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SOGA3Q5TF21 947 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.11■■□□□ 1.13
HOXC4-201ENST00000303406 SMARCE1Q969G3 411 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 PRPHP41219 470 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 ZNF543Q08ER8 600 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 USP49Q70CQ1 688 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 MLKLQ8NB16 471 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 SPC24Q8NBT2 197 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 MKL1Q969V6 931 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 TTC12Q9H892 705 aaPredicted RBP22.11■■□□□ 1.13
HOXC4-201ENST00000303406 CLIP2Q9UDT6 1046 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 MAN1B1Q9UKM7 699 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 MTMR7Q9Y216 660 aa22.11■■□□□ 1.13
HOXC4-201ENST00000303406 ADAMTS3O15072 1205 aa22.1■■□□□ 1.13
HOXC4-201ENST00000303406 MYL5Q02045 173 aa22.1■■□□□ 1.13
HOXC4-201ENST00000303406 MORC3Q14149 939 aa22.1■■□□□ 1.13
HOXC4-201ENST00000303406 TATDN1Q6P1N9 297 aa22.1■■□□□ 1.13
HOXC4-201ENST00000303406 DRC7Q8IY82 874 aa22.1■■□□□ 1.13
HOXC4-201ENST00000303406 NYAP2Q9P242 653 aa22.1■■□□□ 1.13
HOXC4-201ENST00000303406 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
HOXC4-201ENST00000303406 MYH4Q9Y623 1939 aa22.09■■□□□ 1.13
HOXC4-201ENST00000303406 VWA3AA6NCI4 1184 aa22.09■■□□□ 1.13
HOXC4-201ENST00000303406 NEMFO60524 1076 aa22.09■■□□□ 1.13
HOXC4-201ENST00000303406 MCM7P33993 719 aa22.09■■□□□ 1.13
HOXC4-201ENST00000303406 DHX8Q14562 1220 aaKnown RBP22.09■■□□□ 1.13
HOXC4-201ENST00000303406 LRRC47Q8N1G4 583 aaKnown RBP22.09■■□□□ 1.13
HOXC4-201ENST00000303406 EPSTI1Q96J88 318 aa22.09■■□□□ 1.13
HOXC4-201ENST00000303406 PIGSQ96S52 555 aa22.09■■□□□ 1.13
HOXC4-201ENST00000303406 KCNF1Q9H3M0 494 aa22.09■■□□□ 1.13
HOXC4-201ENST00000303406 DNAJC18Q9H819 358 aa22.09■■□□□ 1.13
HOXC4-201ENST00000303406 SMCO2A6NFE2 343 aa22.08■■□□□ 1.13
HOXC4-201ENST00000303406 YDJCA8MPS7 323 aa22.08■■□□□ 1.13
HOXC4-201ENST00000303406 C21orf2O43822 256 aa22.08■■□□□ 1.13
HOXC4-201ENST00000303406 RBM5P52756 815 aaKnown RBP eCLIP22.08■■□□□ 1.13
HOXC4-201ENST00000303406 NONOQ15233 471 aaKnown RBP eCLIP22.08■■□□□ 1.13
HOXC4-201ENST00000303406 RASGRP2Q7LDG7 609 aa22.08■■□□□ 1.13
HOXC4-201ENST00000303406 ZFPM1Q8IX07 1006 aa22.08■■□□□ 1.13
HOXC4-201ENST00000303406 IQUBQ8NA54 791 aa22.08■■□□□ 1.13
HOXC4-201ENST00000303406 DHX58Q96C10 678 aa22.08■■□□□ 1.13
HOXC4-201ENST00000303406 A0A087X0B3 334 aa22.07■■□□□ 1.12
HOXC4-201ENST00000303406 FOXN1O15353 648 aa22.07■■□□□ 1.12
HOXC4-201ENST00000303406 TXLNAP40222 546 aa22.07■■□□□ 1.12
HOXC4-201ENST00000303406 E2F4Q16254 413 aa22.07■■□□□ 1.12
HOXC4-201ENST00000303406 CCDC186Q7Z3E2 898 aa22.07■■□□□ 1.12
HOXC4-201ENST00000303406 RASGRP4Q8TDF6 673 aa22.07■■□□□ 1.12
HOXC4-201ENST00000303406 MTMR8Q96EF0 704 aa22.07■■□□□ 1.12
HOXC4-201ENST00000303406 KANSL2Q9H9L4 492 aa22.07■■□□□ 1.12
HOXC4-201ENST00000303406 DDTLA6NHG4 134 aaPredicted RBP22.06■■□□□ 1.12
HOXC4-201ENST00000303406 PRR29P0C7W0 189 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 IL17AQ16552 155 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 CFAP100Q494V2 611 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 CERKLQ49MI3 558 aaPredicted RBP22.06■■□□□ 1.12
HOXC4-201ENST00000303406 RSBN1LQ6PCB5 846 aaPredicted RBP22.06■■□□□ 1.12
HOXC4-201ENST00000303406 SH3BP5LQ7L8J4 393 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 HOMER1Q86YM7 354 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 PDILTQ8N807 584 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 DCAF4Q8WV16 495 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 PAGE5Q96GU1 130 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 ZNF830Q96NB3 372 aaPredicted RBP22.06■■□□□ 1.12
HOXC4-201ENST00000303406 TRIM34Q9BYJ4 488 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 SPTLC3Q9NUV7 552 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 IMPACTQ9P2X3 320 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 SYNPO2Q9UMS6 1093 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 PNMA6FA0A0J9YX94 578 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 PTGS1P23219 599 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 INF2Q27J81 1249 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 DTHD1Q6ZMT9 781 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 TMEM179Q6ZVK1 233 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 KIAA1524Q8TCG1 905 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 GSDMAQ96QA5 445 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 UBA5Q9GZZ9 404 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 CPVLQ9H3G5 476 aa22.06■■□□□ 1.12
HOXC4-201ENST00000303406 FRMPD2Q68DX3 1309 aaPredicted RBP22.05■■□□□ 1.12
HOXC4-201ENST00000303406 MPHOSPH10O00566 681 aaKnown RBP22.05■■□□□ 1.12
HOXC4-201ENST00000303406 VIL1P09327 827 aaKnown RBP22.05■■□□□ 1.12
HOXC4-201ENST00000303406 BMP6P22004 513 aa22.05■■□□□ 1.12
HOXC4-201ENST00000303406 ERCC5P28715 1186 aaPredicted RBP22.05■■□□□ 1.12
HOXC4-201ENST00000303406 REXO1Q8N1G1 1221 aaKnown RBP22.05■■□□□ 1.12
HOXC4-201ENST00000303406 ENOX1Q8TC92 643 aaKnown RBP22.05■■□□□ 1.12
HOXC4-201ENST00000303406 PCDHAC2Q9Y5I4 1007 aa22.05■■□□□ 1.12
HOXC4-201ENST00000303406 CBFA2T2O43439 604 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 KCNA3P22001 575 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 DPYDQ12882 1025 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 SEMA3FQ13275 785 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 NEK8Q86SG6 692 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 AK8Q96MA6 479 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 GMLQ99445 158 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 CCSER1Q9C0I3 900 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 HSD3B7Q9H2F3 369 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 JMJD4Q9H9V9 463 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 VAT1LQ9HCJ6 419 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 HDAC9Q9UKV0 1011 aa22.04■■□□□ 1.12
HOXC4-201ENST00000303406 ADCY7P51828 1080 aa22.03■■□□□ 1.12
HOXC4-201ENST00000303406 TERF1P54274 439 aa22.03■■□□□ 1.12
HOXC4-201ENST00000303406 EIF6P56537 245 aaKnown RBP22.03■■□□□ 1.12
HOXC4-201ENST00000303406 GSDMDP57764 484 aa22.03■■□□□ 1.12
HOXC4-201ENST00000303406 TCP10Q12799 353 aa22.03■■□□□ 1.12
HOXC4-201ENST00000303406 NOLC1Q14978 699 aaKnown RBP eCLIP22.03■■□□□ 1.12
HOXC4-201ENST00000303406 ISM2Q6H9L7 571 aa22.03■■□□□ 1.12
HOXC4-201ENST00000303406 PDXDC2PQ6P474 469 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms