RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 KRT14P02533 472 aa16.41■□□□□ 0.22
COL6A2-201ENST00000300527 PLEKP08567 350 aaPredicted RBP16.41■□□□□ 0.22
COL6A2-201ENST00000300527 NFRKBQ6P4R8 1299 aa16.41■□□□□ 0.22
COL6A2-201ENST00000300527 SECISBP2LQ93073 1101 aaKnown RBP16.41■□□□□ 0.22
COL6A2-201ENST00000300527 TNKSO95271 1327 aa16.41■□□□□ 0.22
COL6A2-201ENST00000300527 PSMD14O00487 310 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 TTLL11Q8NHH1 800 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 CCDC42Q96M95 316 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 YY1AP1Q9H869 796 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 CNNM2Q9H8M5 875 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 NHEJ1Q9H9Q4 299 aaPredicted RBP16.4■□□□□ 0.22
COL6A2-201ENST00000300527 RWDD2AQ9UIY3 292 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 STK36Q9NRP7 1315 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 HPDP32754 393 aaPredicted RBP16.4■□□□□ 0.22
COL6A2-201ENST00000300527 APBA1Q02410 837 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 TRIM14Q14142 442 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 UBE3CQ15386 1083 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 SHISA4Q96DD7 197 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 FAM184BQ9ULE4 1060 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 TSEN2Q8NCE0 465 aaKnown RBP16.4■□□□□ 0.22
COL6A2-201ENST00000300527 RASGRP4Q8TDF6 673 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 UBR1Q8IWV7 1749 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 ITIH6Q6UXX5 1313 aa16.4■□□□□ 0.22
COL6A2-201ENST00000300527 EIF3HO15372 352 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL6A2-201ENST00000300527 GUCY1A3Q02108 690 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 KIF6Q6ZMV9 814 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 GSG1L2A8MUP6 293 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 IQCEQ6IPM2 695 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 WDR59Q6PJI9 974 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 MTRQ99707 1265 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 NFAT5O94916 1531 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 BUB1O43683 1085 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 PTPROQ16827 1216 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 CCDC178Q5BJE1 867 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 EP400NLQ6ZTU2 488 aa16.39■□□□□ 0.21
COL6A2-201ENST00000300527 ELOA2Q8IYF1 753 aaPredicted RBP16.39■□□□□ 0.21
COL6A2-201ENST00000300527 FAM207AQ9NSI2 230 aaPredicted RBP16.39■□□□□ 0.21
COL6A2-201ENST00000300527 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
COL6A2-201ENST00000300527 SEMA3EO15041 775 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 AKR1B10O60218 316 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 CSGALNACT2Q8N6G5 542 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 EHBP1Q8NDI1 1231 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 FERMT2Q96AC1 680 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 CXorf56Q9H5V9 222 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 MYH8P13535 1937 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 OPA1O60313 960 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 IFIT1BQ5T764 474 aaKnown RBP16.38■□□□□ 0.21
COL6A2-201ENST00000300527 SH3RF1Q7Z6J0 888 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 SPATA5Q8NB90 893 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 CD248Q9HCU0 757 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 CAPN6Q9Y6Q1 641 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
COL6A2-201ENST00000300527 BACH1O14867 736 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 GTPBP6O43824 516 aaPredicted RBP16.38■□□□□ 0.21
COL6A2-201ENST00000300527 RDXP35241 583 aaKnown RBP16.38■□□□□ 0.21
COL6A2-201ENST00000300527 USP8P40818 1118 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 SEC24CP53992 1094 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 MAATS1Q7Z4T9 603 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
COL6A2-201ENST00000300527 MSL3Q8N5Y2 521 aaKnown RBP16.38■□□□□ 0.21
COL6A2-201ENST00000300527 CCDC43Q96MW1 224 aaKnown RBP16.38■□□□□ 0.21
COL6A2-201ENST00000300527 BCCIPQ9P287 314 aaKnown RBP eCLIP16.38■□□□□ 0.21
COL6A2-201ENST00000300527 SOS2Q07890 1332 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-201ENST00000300527 ZSCAN5CA6NGD5 496 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-201ENST00000300527 TACC1O75410 805 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 ZNF658Q5TYW1 1059 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-201ENST00000300527 KCNV1Q6PIU1 500 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 CATIPQ7Z7H3 387 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 MS4A14Q96JA4 679 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 ECM2O94769 699 aaPredicted RBP16.37■□□□□ 0.21
COL6A2-201ENST00000300527 NNTQ13423 1086 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 C8orf74Q6P047 294 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 FAM212AQ96EL1 285 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 TUBGCP2Q9BSJ2 902 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 IFIH1Q9BYX4 1025 aaKnown RBP16.37■□□□□ 0.21
COL6A2-201ENST00000300527 MMRN2Q9H8L6 949 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 RIPOR2Q9Y4F9 1068 aa16.37■□□□□ 0.21
COL6A2-201ENST00000300527 LGALS16A8MUM7 142 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 VEGFAP15692 232 aaPredicted RBP16.36■□□□□ 0.21
COL6A2-201ENST00000300527 RASGRF1Q13972 1273 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 PAPD7Q5XG87 772 aaKnown RBP16.36■□□□□ 0.21
COL6A2-201ENST00000300527 GBP6Q6ZN66 633 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 CEP57Q86XR8 500 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 MEGF6O75095 1541 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 CYP7A1P22680 504 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 PAFAH1B1P43034 410 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 ACTN3Q08043 901 aaPredicted RBP16.36■□□□□ 0.21
COL6A2-201ENST00000300527 IFT88Q13099 833 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 CFAP58Q5T655 872 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 NOC3LQ8WTT2 800 aaKnown RBP16.36■□□□□ 0.21
COL6A2-201ENST00000300527 HPS3Q969F9 1004 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 PPANQ9NQ55 473 aaKnown RBP16.36■□□□□ 0.21
COL6A2-201ENST00000300527 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 LMO7Q8WWI1 1683 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 FAM170AA1A519 330 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 IRS4O14654 1257 aaPredicted RBP16.36■□□□□ 0.21
COL6A2-201ENST00000300527 ADAMTS3O15072 1205 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 USO1O60763 962 aaKnown RBP16.36■□□□□ 0.21
COL6A2-201ENST00000300527 TTMPQ5BVD1 217 aa16.36■□□□□ 0.21
COL6A2-201ENST00000300527 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms