RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 CYB5R4Q7L1T6 521 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 CRACR2BQ8N4Y2 399 aaPredicted RBP7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 CLMNQ96JQ2 1002 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 JAKMIP1Q96N16 626 aaKnown RBP7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 ZKSCAN3Q9BRR0 538 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 UPF3BQ9BZI7 483 aaKnown RBP7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 NACAP1Q9BZK3 213 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 ZFAND3Q9H8U3 227 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 ATP8A2Q9NTI2 1148 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 ZMYM6O95789 1325 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 PITPNM2Q9BZ72 1349 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 PCNTO95613 3336 aa7.7□□□□□ -1.18
DEPDC4-201ENST00000299185 ATAD5Q96QE3 1844 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 DOCK1Q14185 1865 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 E7EWF7 191 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 CELF2O95319 508 aaKnown RBP7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 HLA-DOAP06340 250 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 RASA1P20936 1047 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 TNNI2P48788 182 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 CDK8P49336 464 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 FSTL1Q12841 308 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 TNFAIP1Q13829 316 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 TTLL12Q14166 644 aaPredicted RBP7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 ARID5BQ14865 1188 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 C16orf86Q6ZW13 317 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 FAM83AQ86UY5 434 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 PNMA8AQ86V59 439 aaPredicted RBP7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 MB21D2Q8IYB1 491 aaPredicted RBP7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 PRR7Q8TB68 274 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 ITPKCQ96DU7 683 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 CNTNAP3BQ96NU0 1288 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 KIF2CQ99661 725 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 CNTNAP3Q9BZ76 1288 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 C22orf23Q9BZE7 217 aa7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 GREB1LQ9C091 1923 aaPredicted RBP7.69□□□□□ -1.18
DEPDC4-201ENST00000299185 MYH8P13535 1937 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 UBE2Q2LH0YL09 131 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 MPHOSPH10O00566 681 aaKnown RBP7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 ZMYND10O75800 440 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 GH2P01242 217 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 NDUFV2P19404 249 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 GUCY1A2P33402 732 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 IMMTQ16891 758 aaKnown RBP7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 SBK1Q52WX2 424 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 AKNAD1Q5T1N1 836 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 FKBP1CQ5VVH2 108 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 GPAT2Q6NUI2 795 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 KANK3Q6NY19 840 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 GIMAP6Q6P9H5 292 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 LINC00528Q8N1L1 170 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 STAG1Q8WVM7 1258 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 ZKSCAN4Q969J2 545 aaPredicted RBP7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 CCDC102AQ96A19 550 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 DDRGK1Q96HY6 314 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 TBC1D32Q96NH3 1257 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 WRNIP1Q96S55 665 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 TRIM34Q9BYJ4 488 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 ELP3Q9H9T3 547 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 SERPINB13Q9UIV8 391 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 ANGEL1Q9UNK9 670 aaKnown RBP7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
DEPDC4-201ENST00000299185 ZNF213O14771 459 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 RANBP6O60518 1105 aaKnown RBP7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 IGSF3O75054 1194 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 USP2O75604 605 aaPredicted RBP7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 CASTP20810 708 aaKnown RBP7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 GJA5P36382 358 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 KRT76Q01546 638 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 ATP2B2Q01814 1243 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 VGLL4Q14135 290 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 SEPT2Q15019 361 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 ZYXQ15942 572 aaKnown RBP7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 TMED8Q6PL24 325 aaPredicted RBP7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 CDC37L1Q7L3B6 337 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 TTC6Q86TZ1 520 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 TICAM2Q86XR7 235 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 CERS3Q8IU89 383 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 LRRC47Q8N1G4 583 aaKnown RBP7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 SVOPQ8N4V2 548 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 GPR161Q8N6U8 529 aaKnown RBP7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 SPIRE2Q8WWL2 714 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 KCNB2Q92953 911 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 MYL10Q9BUA6 226 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 ZNF341Q9BYN7 854 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 EHD4Q9H223 541 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 CTNNA3Q9UI47 895 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 ANAPC4Q9UJX5 808 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 ZBTB21Q9ULJ3 1066 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 SNCAIPQ9Y6H5 919 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 PASKQ96RG2 1323 aa7.67□□□□□ -1.18
DEPDC4-201ENST00000299185 PHF20L1A8MW92 1017 aa7.66□□□□□ -1.18
DEPDC4-201ENST00000299185 PRC1O43663 620 aa7.66□□□□□ -1.18
DEPDC4-201ENST00000299185 LARGE1O95461 756 aa7.66□□□□□ -1.18
DEPDC4-201ENST00000299185 TAL1P17542 331 aaPredicted RBP7.66□□□□□ -1.18
DEPDC4-201ENST00000299185 RXRAP19793 462 aa7.66□□□□□ -1.18
DEPDC4-201ENST00000299185 MCCP23508 829 aa7.66□□□□□ -1.18
DEPDC4-201ENST00000299185 CTHP32929 405 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms