RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 AGPAT5Q9NUQ2 364 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 NALCNQ8IZF0 1738 aa12.75□□□□□ -0.37
TRUB1-201ENST00000298746 GOLGA8KD6RF30 607 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 MYO1FO00160 1098 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 AMPD2Q01433 879 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 ATP2B2Q01814 1243 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 SF3A3Q12874 501 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 UBE3CQ15386 1083 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 APTXQ7Z2E3 356 aaKnown RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 MB21D1Q8N884 522 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 HDAC7Q8WUI4 952 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 ESR2Q92731 530 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 GREM2Q9H772 168 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 NHEJ1Q9H9Q4 299 aaPredicted RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 FAM207AQ9NSI2 230 aaPredicted RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 DMGDHQ9UI17 866 aaKnown RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 GOLGA6L7A0A1B0GV03 622 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 IQCA1Q86XH1 822 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 SDR42E1Q8WUS8 393 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 NOC4LQ9BVI4 516 aaKnown RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 CXorf56Q9H5V9 222 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 PPANQ9NQ55 473 aaKnown RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 NUTM2BA6NNL0 878 aaPredicted RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 NUTM2EB1AL46 878 aaPredicted RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 H7C1D1 291 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 PSMD14O00487 310 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 EIF3HO15372 352 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 PRPF6O94906 941 aaKnown RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 AARSP49588 968 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 TCIRG1Q13488 830 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 EARS2Q5JPH6 523 aaKnown RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 CABS1Q96KC9 395 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 CCDC114Q96M63 670 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 EHD2Q9NZN4 543 aa12.74□□□□□ -0.37
TRUB1-201ENST00000298746 LIMA1Q9UHB6 759 aaKnown RBP12.74□□□□□ -0.37
TRUB1-201ENST00000298746 TNKSO95271 1327 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 STK36Q9NRP7 1315 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 MYH8P13535 1937 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 ESYT3A0FGR9 886 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 PDE2AO00408 941 aaPredicted RBP12.73□□□□□ -0.37
TRUB1-201ENST00000298746 MOCS3O95396 460 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 KRT14P02533 472 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 PBX1P40424 430 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 IFT88Q13099 833 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 NNTQ13423 1086 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 CACNA2D4Q7Z3S7 1137 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 ELOA2Q8IYF1 753 aaPredicted RBP12.73□□□□□ -0.37
TRUB1-201ENST00000298746 ARL8AQ96BM9 186 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
TRUB1-201ENST00000298746 SCLT1Q96NL6 688 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 ITIH6Q6UXX5 1313 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 E7EVH7 732 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 BUB1O43683 1085 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 UQCRFS1P1P0C7P4 283 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 MSL3Q8N5Y2 521 aaKnown RBP12.73□□□□□ -0.37
TRUB1-201ENST00000298746 KAT2BQ92831 832 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 TUBGCP2Q9BSJ2 902 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 MLXIPQ9HAP2 919 aa12.73□□□□□ -0.37
TRUB1-201ENST00000298746 REXO2Q9Y3B8 237 aaKnown RBP12.73□□□□□ -0.37
TRUB1-201ENST00000298746 CYP7A1P22680 504 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 HERVK_113P62684 666 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 ZNF658Q5TYW1 1059 aaPredicted RBP12.72□□□□□ -0.37
TRUB1-201ENST00000298746 NFRKBQ6P4R8 1299 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 TICAM2Q86XR7 235 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 DDX17Q92841 729 aaKnown RBP12.72□□□□□ -0.37
TRUB1-201ENST00000298746 TARSL2A2RTX5 802 aaKnown RBP12.72□□□□□ -0.37
TRUB1-201ENST00000298746 PLEKHA8P1O95397 391 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 CCDC172P0C7W6 258 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 NF2P35240 595 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 KLK7P49862 253 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 DNM2P50570 870 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 GUCY1A3Q02108 690 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 TRIM58Q8NG06 486 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 EXOC1Q9NV70 894 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 ARID5AQ03989 594 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 LCORLQ8N3X6 602 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 SPATA5Q8NB90 893 aa12.72□□□□□ -0.37
TRUB1-201ENST00000298746 EPB41L4AQ9HCS5 686 aaPredicted RBP12.72□□□□□ -0.37
TRUB1-201ENST00000298746 OVOS2A0A0G2JMS6 1433 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 XDHP47989 1333 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 TULP1O00294 542 aaPredicted RBP12.71□□□□□ -0.37
TRUB1-201ENST00000298746 NCK2O43639 380 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 SLC5A1P13866 664 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 ASIC1P78348 528 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 GUCY2DQ02846 1103 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 CCDC121Q6ZUS5 278 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 BANK1Q8NDB2 785 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 CCDC194A0A1B0GVG4 234 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 LGALS16A8MUM7 142 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 MAGEA1P43355 309 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 EPHB4P54760 987 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 SPATA4Q8NEY3 305 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 CEP89Q96ST8 783 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 NFU1Q9UMS0 254 aa12.71□□□□□ -0.37
TRUB1-201ENST00000298746 MYH15Q9Y2K3 1946 aa12.71□□□□□ -0.38
TRUB1-201ENST00000298746 IRS4O14654 1257 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms