RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 DOK7Q18PE1 504 aa17.75■□□□□ 0.43
ARHGEF28-201ENST00000296794 SRGAP1Q7Z6B7 1085 aa17.75■□□□□ 0.43
ARHGEF28-201ENST00000296794 FNBP1Q96RU3 617 aa17.75■□□□□ 0.43
ARHGEF28-201ENST00000296794 LSM14BQ9BX40 385 aaKnown RBP17.75■□□□□ 0.43
ARHGEF28-201ENST00000296794 AZI2Q9H6S1 392 aa17.75■□□□□ 0.43
ARHGEF28-201ENST00000296794 GINS2Q9Y248 185 aa17.75■□□□□ 0.43
ARHGEF28-201ENST00000296794 TRPM1Q7Z4N2 1603 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 COPB1P53618 953 aaKnown RBP17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 BIRC3Q13489 604 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 MTMR3Q13615 1198 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 USP6P35125 1406 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 E7EVH7 732 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 SASH1O94885 1247 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 ERCC5P28715 1186 aaPredicted RBP17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 GNGT1P63211 74 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 KRT71Q3SY84 523 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 FAM182BQ5T319 152 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 ARHGEF35A5YM69 484 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 ALDH3A1P30838 453 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 CHRNDQ07001 517 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 STK24Q9Y6E0 443 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 PHLPP2Q6ZVD8 1323 aa17.74■□□□□ 0.43
ARHGEF28-201ENST00000296794 PABPN1LA6NDY0 278 aaKnown RBP17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 CCDC169A6NNP5 214 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 SERPINB2P05120 415 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 TECP42680 631 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 NAA25Q14CX7 972 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 ZNF365Q70YC5 407 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 SLC35F6Q8N357 371 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 GSDMAQ96QA5 445 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 GREM2Q9H772 168 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 GCNT3O95395 438 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 WDR44Q5JSH3 913 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 GPKOWQ92917 476 aaPredicted RBP eCLIP17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 FOXP1Q9H334 677 aaPredicted RBP17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 SPTLC3Q9NUV7 552 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 SLC5A4Q9NY91 659 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 COBLO75128 1261 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 DCPSQ96C86 337 aaKnown RBP17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 TRIM7Q9C029 511 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 MED4Q9NPJ6 270 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 HARSP12081 509 aaKnown RBP17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 FERP16591 822 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 MYOCDQ8IZQ8 938 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 MRPL44Q9H9J2 332 aaKnown RBP17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 ASIC3Q9UHC3 531 aa17.73■□□□□ 0.43
ARHGEF28-201ENST00000296794 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 PDE8BO95263 885 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 USH1GQ495M9 461 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 MYCT1Q8N699 235 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 PNMA1Q8ND90 353 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 FAM71BQ8TC56 605 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 ZNF804BA4D1E1 1349 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 NT5C3AQ9H0P0 336 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 PREX2Q70Z35 1606 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 EXOC3O60645 756 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 FMNL1O95466 1100 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 GNA14O95837 355 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 CROCCP2Q86T23 111 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 BUB1O43683 1085 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 TCP1P17987 556 aaKnown RBP17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 STIM2Q9P246 746 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 LEMD3Q9Y2U8 911 aa17.72■□□□□ 0.43
ARHGEF28-201ENST00000296794 XDHP47989 1333 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 DDAH1O94760 285 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 OR52Z1P0C646 297 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 PTPN12Q05209 780 aaKnown RBP17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 PABPC4Q13310 644 aaKnown RBP eCLIP17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 ATP8B1O43520 1251 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 SCNN1DP51172 638 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 RBL2Q08999 1139 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 OSBP2Q969R2 916 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 SPC25Q9HBM1 224 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 BBOX1O75936 387 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 LONP1P36776 959 aaKnown RBP17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 MAEAQ7L5Y9 396 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 TAOK1Q7L7X3 1001 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 GRAMD1CQ8IYS0 662 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 EEF2KMTQ96G04 330 aa17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 PPANQ9NQ55 473 aaKnown RBP17.71■□□□□ 0.43
ARHGEF28-201ENST00000296794 UAP1Q16222 522 aaPredicted RBP17.71■□□□□ 0.42
ARHGEF28-201ENST00000296794 LONRF2Q1L5Z9 754 aa17.71■□□□□ 0.42
ARHGEF28-201ENST00000296794 THRAP3Q9Y2W1 955 aaKnown RBP17.71■□□□□ 0.42
ARHGEF28-201ENST00000296794 KIF1BO60333 1816 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 KCNK3O14649 394 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 HGSO14964 777 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 CEP85LQ5SZL2 805 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 SMYD4Q8IYR2 804 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 GOLGA5Q8TBA6 731 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 KIFC2Q96AC6 838 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 MRRFQ96E11 262 aaKnown RBP17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 MAN1B1Q9UKM7 699 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 ZDHHC9Q9Y397 364 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 GOLGA8KD6RF30 607 aa17.7■□□□□ 0.42
ARHGEF28-201ENST00000296794 CTNNA1P35221 906 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms