RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 PCDHA4Q9UN74 947 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 ROBO3Q96MS0 1386 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 COBLO75128 1261 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 BAG3O95817 575 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 GPSM2P81274 684 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 TYW1BQ6NUM6 668 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 SLC44A5Q8NCS7 719 aa17.07■□□□□ 0.32
CCDC116-201ENST00000292779 CDK5RAP2Q96SN8 1893 aa17.06■□□□□ 0.32
CCDC116-201ENST00000292779 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
CCDC116-201ENST00000292779 AKR1B15C9JRZ8 316 aaPredicted RBP17.06■□□□□ 0.32
CCDC116-201ENST00000292779 URI1O94763 535 aaPredicted RBP17.06■□□□□ 0.32
CCDC116-201ENST00000292779 TSPY3P0CV98 308 aa17.06■□□□□ 0.32
CCDC116-201ENST00000292779 TSPY8P0CW00 308 aa17.06■□□□□ 0.32
CCDC116-201ENST00000292779 CDC25AP30304 524 aa17.06■□□□□ 0.32
CCDC116-201ENST00000292779 GSTO1P78417 241 aa17.06■□□□□ 0.32
CCDC116-201ENST00000292779 SLC35G1Q2M3R5 365 aa17.06■□□□□ 0.32
CCDC116-201ENST00000292779 ARL6IP4Q66PJ3 421 aaKnown RBP17.06■□□□□ 0.32
CCDC116-201ENST00000292779 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
CCDC116-201ENST00000292779 PYM1Q9BRP8 204 aaKnown RBP17.06■□□□□ 0.32
CCDC116-201ENST00000292779 UTRNP46939 3433 aa17.06■□□□□ 0.32
CCDC116-201ENST00000292779 GOLGA6L9A6NEM1 432 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 GTPBP6O43824 516 aaPredicted RBP17.05■□□□□ 0.32
CCDC116-201ENST00000292779 LONP1P36776 959 aaKnown RBP17.05■□□□□ 0.32
CCDC116-201ENST00000292779 PBX1P40424 430 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 PPP4CP60510 307 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 RBL2Q08999 1139 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 MAPKAPK5Q8IW41 473 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 IGSF22Q8N9C0 903 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 PANX2Q96RD6 677 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 CTAGE1Q96RT6 745 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 DESI2Q9BSY9 194 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 MTMR7Q9Y216 660 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 PARP3Q9Y6F1 533 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 UFL1O94874 794 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 ZSCAN20P17040 1043 aaPredicted RBP17.05■□□□□ 0.32
CCDC116-201ENST00000292779 MTF1Q14872 753 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 AMOTL1Q8IY63 956 aa17.05■□□□□ 0.32
CCDC116-201ENST00000292779 ZNF444Q8N0Y2 327 aaPredicted RBP17.05■□□□□ 0.32
CCDC116-201ENST00000292779 SAP30BPQ9UHR5 308 aaKnown RBP17.05■□□□□ 0.32
CCDC116-201ENST00000292779 M0R2N6 131 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 CYTH3O43739 400 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 NT5C2P49902 561 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 GNAQP50148 359 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 WWC2Q6AWC2 1192 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 PPFIBP1Q86W92 1011 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 CPLX3Q8WVH0 158 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 WDR24Q96S15 920 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 RTFDC1Q9BY42 306 aaPredicted RBP17.04■□□□□ 0.32
CCDC116-201ENST00000292779 CD209Q9NNX6 404 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 MYH8P13535 1937 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 SOWAHDA6NJG2 315 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 GNG11P61952 73 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 FILIP1LQ4L180 1135 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 CCDC178Q5BJE1 867 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 C15orf52Q6ZUT6 534 aaKnown RBP17.04■□□□□ 0.32
CCDC116-201ENST00000292779 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 PCDHA6Q9UN73 950 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 STX8Q9UNK0 236 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 PCDHA8Q9Y5H6 950 aa17.04■□□□□ 0.32
CCDC116-201ENST00000292779 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 IGSF3O75054 1194 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 LDHCP07864 332 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 KARSQ15046 597 aaKnown RBP17.03■□□□□ 0.32
CCDC116-201ENST00000292779 HEATR3Q7Z4Q2 680 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 UPF1Q92900 1129 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCDC116-201ENST00000292779 TMEM47Q9BQJ4 181 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 RPN1P04843 607 aaKnown RBP17.03■□□□□ 0.32
CCDC116-201ENST00000292779 RASA1P20936 1047 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 HOXA10P31260 410 aaPredicted RBP17.03■□□□□ 0.32
CCDC116-201ENST00000292779 CASQ1P31415 396 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 TXLNAP40222 546 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
CCDC116-201ENST00000292779 STAT6P42226 847 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 BTDP43251 543 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 ZNF658Q5TYW1 1059 aaPredicted RBP17.03■□□□□ 0.32
CCDC116-201ENST00000292779 SRRTQ9BXP5 876 aaKnown RBP17.03■□□□□ 0.32
CCDC116-201ENST00000292779 RWDD2AQ9UIY3 292 aa17.03■□□□□ 0.32
CCDC116-201ENST00000292779 STXBP3O00186 592 aa17.02■□□□□ 0.32
CCDC116-201ENST00000292779 SRGNP10124 158 aa17.02■□□□□ 0.32
CCDC116-201ENST00000292779 H2AFXP16104 143 aaPredicted RBP17.02■□□□□ 0.32
CCDC116-201ENST00000292779 PAK1Q13153 545 aa17.02■□□□□ 0.32
CCDC116-201ENST00000292779 KRT31Q15323 416 aa17.02■□□□□ 0.32
CCDC116-201ENST00000292779 ARHGAP29Q52LW3 1261 aa17.02■□□□□ 0.32
CCDC116-201ENST00000292779 MNS1Q8NEH6 495 aa17.02■□□□□ 0.32
CCDC116-201ENST00000292779 CARD6Q9BX69 1037 aa17.02■□□□□ 0.32
CCDC116-201ENST00000292779 TMEM60Q9H2L4 133 aa17.02■□□□□ 0.32
CCDC116-201ENST00000292779 SLX4Q8IY92 1834 aa17.02■□□□□ 0.31
CCDC116-201ENST00000292779 PALM3A6NDB9 673 aaPredicted RBP17.01■□□□□ 0.31
CCDC116-201ENST00000292779 MFAP3LO75121 409 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 GOLGA8HP0CJ92 632 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 CHRNA5P30532 468 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 INF2Q27J81 1249 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 RAD9BQ6WBX8 426 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 DTHD1Q6ZMT9 781 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 RASGRP2Q7LDG7 609 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 DAGLBQ8NCG7 672 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 CCDC148Q8NFR7 591 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 NELFBQ8WX92 580 aa17.01■□□□□ 0.31
CCDC116-201ENST00000292779 MRPL44Q9H9J2 332 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms