RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 GYS2P54840 703 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 CUL4BQ13620 913 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 CYP26C1Q6V0L0 522 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 PHLDB2Q86SQ0 1253 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 STAG2Q8N3U4 1231 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 GTPBP4Q9BZE4 634 aaKnown RBP5.34□□□□□ -1.56
UBR1-201ENST00000290650 PSTPIP2Q9H939 334 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 TMEM260Q9NX78 707 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 RCOR1Q9UKL0 485 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 HDAC9Q9UKV0 1011 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 CLEC11AQ9Y240 323 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 BCS1LQ9Y276 419 aa5.34□□□□□ -1.56
UBR1-201ENST00000290650 FER1L4A9Z1Z3 1794 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 MRPL12P52815 198 aaKnown RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 GPBP1Q86WP2 473 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 NAPGQ99747 312 aaPredicted RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 GBP3Q9H0R5 595 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 UBN2Q6ZU65 1347 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 PLCD1P51178 756 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 GUCY2FP51841 1108 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 NAA35Q5VZE5 725 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 CCDC65Q8IXS2 484 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 ENAHQ8N8S7 591 aaPredicted RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 TBCKQ8TEA7 893 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 TBC1D5Q92609 795 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 PYM1Q9BRP8 204 aaKnown RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 LSM14BQ9BX40 385 aaKnown RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 MYO1AQ9UBC5 1043 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 DDX25Q9UHL0 483 aaKnown RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 HSF2BPO75031 334 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 GRIN1Q05586 938 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 SPAG1Q07617 926 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.33□□□□□ -1.56
UBR1-201ENST00000290650 PCDHA12Q9UN75 941 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 KIAA1024Q9UPX6 916 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 GSG1L2A8MUP6 293 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 CLIC2O15247 247 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 CTDNEP1O95476 244 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 PABPC4Q13310 644 aaKnown RBP eCLIP5.33□□□□□ -1.56
UBR1-201ENST00000290650 CERKLQ49MI3 558 aaPredicted RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 CNNM4Q6P4Q7 775 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 TOGARAM2Q6ZUX3 1019 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 TXLNBQ8N3L3 684 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 UBLCP1Q8WVY7 318 aaPredicted RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 ERO1AQ96HE7 468 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 KCNF1Q9H3M0 494 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 SPTLC3Q9NUV7 552 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 USP49Q70CQ1 688 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 C10orf67Q8IYJ2 551 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 TAB3Q8N5C8 712 aaPredicted RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 ATRIPQ8WXE1 791 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 TEKT1Q969V4 418 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 KANSL2Q9H9L4 492 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 PPEF1O14829 653 aaPredicted RBP5.33□□□□□ -1.56
UBR1-201ENST00000290650 KRT83P78385 493 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 PPP4R3AQ6IN85 833 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 CEP112Q8N8E3 955 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 JDP2Q8WYK2 163 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 SELENOSQ9BQE4 189 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 EHMT1Q9H9B1 1298 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 POLR3EQ9NVU0 708 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 TNS3Q68CZ2 1445 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 C1orf167Q5SNV9 1468 aa5.33□□□□□ -1.56
UBR1-201ENST00000290650 TESPA1A2RU30 521 aaPredicted RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 USP17L5A8MUK1 530 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 SMIM22K7EJ46 135 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 DHX40Q8IX18 779 aaKnown RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 TDRD7Q8NHU6 1098 aaKnown RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 UHMK1Q8TAS1 419 aaKnown RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 SMCR8Q8TEV9 937 aaPredicted RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 RIPOR2Q9Y4F9 1068 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 SHTN1A0MZ66 631 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 RDXP35241 583 aaKnown RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 CYP27A1Q02318 531 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 CETN1Q12798 172 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 MB21D2Q8IYB1 491 aaPredicted RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 ZNF710Q8N1W2 664 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 DPF2Q92785 391 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 ARHGEF1Q92888 912 aaKnown RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 FERMT2Q96AC1 680 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 SYNCQ9H7C4 482 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.32□□□□□ -1.56
UBR1-201ENST00000290650 MEGF6O75095 1541 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 ALAS1P13196 640 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 SLC35F6Q8N357 371 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 PSMD1Q99460 953 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 PANK4Q9NVE7 773 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 OGFRQ9NZT2 677 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 SERPINA10Q9UK55 444 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 RICTORQ6R327 1708 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 POTEMA6NI47 508 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 ARHGAP6O43182 974 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 OR52Z1P0C646 297 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 PLCG1P19174 1290 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 OAS2P29728 719 aaKnown RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 POLR2FP61218 127 aaKnown RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 MAP2K1Q02750 393 aaPredicted RBP5.32□□□□□ -1.56
UBR1-201ENST00000290650 ITPK1Q13572 414 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 KIAA0753Q2KHM9 967 aa5.32□□□□□ -1.56
UBR1-201ENST00000290650 SHC4Q6S5L8 630 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms