RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 LUC7L2Q9Y383 392 aaKnown RBP22.9■■□□□ 1.26
TMED4-201ENST00000289577 VGLL3A8MV65 326 aa22.89■■□□□ 1.26
TMED4-201ENST00000289577 BCL9O00512 1426 aa22.89■■□□□ 1.26
TMED4-201ENST00000289577 LONP1P36776 959 aaKnown RBP22.89■■□□□ 1.26
TMED4-201ENST00000289577 EVA1CP58658 441 aa22.89■■□□□ 1.26
TMED4-201ENST00000289577 C4orf32Q8N8J7 132 aa22.89■■□□□ 1.26
TMED4-201ENST00000289577 HDAC6Q9UBN7 1215 aa22.89■■□□□ 1.26
TMED4-201ENST00000289577 SAR1BQ9Y6B6 198 aa22.89■■□□□ 1.26
TMED4-201ENST00000289577 SYF2O95926 243 aaKnown RBP22.89■■□□□ 1.25
TMED4-201ENST00000289577 EEF1GP26641 437 aaKnown RBP22.89■■□□□ 1.25
TMED4-201ENST00000289577 MCM7P33993 719 aa22.89■■□□□ 1.25
TMED4-201ENST00000289577 RPGRIP1Q96KN7 1286 aa22.89■■□□□ 1.25
TMED4-201ENST00000289577 MMS19Q96T76 1030 aa22.89■■□□□ 1.25
TMED4-201ENST00000289577 CICQ96RK0 1608 aaPredicted RBP22.89■■□□□ 1.25
TMED4-201ENST00000289577 PDS5AQ29RF7 1337 aaKnown RBP22.88■■□□□ 1.25
TMED4-201ENST00000289577 ZC3H4Q9UPT8 1303 aaKnown RBP22.88■■□□□ 1.25
TMED4-201ENST00000289577 CYP2D7A0A087X1C5 515 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 PRPF6O94906 941 aaKnown RBP22.88■■□□□ 1.25
TMED4-201ENST00000289577 ATP1A1P05023 1023 aaKnown RBP22.88■■□□□ 1.25
TMED4-201ENST00000289577 MEA1Q16626 185 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 FOXR1Q6PIV2 292 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 ZBTB9Q96C00 473 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 FAM204AQ9H8W3 233 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 ABCA3Q99758 1704 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 ZNF804BA4D1E1 1349 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 CACNA1SQ13698 1873 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 ENC1O14682 589 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 PHACTR2O75167 634 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 SCG2P13521 617 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 MAP9Q49MG5 647 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 LRRC31Q6UY01 552 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 THAP9Q9H5L6 903 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 MAPK8IP1Q9UQF2 711 aa22.88■■□□□ 1.25
TMED4-201ENST00000289577 IGHMBP2P38935 993 aaKnown RBP22.87■■□□□ 1.25
TMED4-201ENST00000289577 NLRP5P59047 1200 aa22.87■■□□□ 1.25
TMED4-201ENST00000289577 HPCAL4Q9UM19 191 aa22.87■■□□□ 1.25
TMED4-201ENST00000289577 BAZ2AQ9UIF9 1905 aaKnown RBP22.87■■□□□ 1.25
TMED4-201ENST00000289577 TRIM49BA6NDI0 452 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 RNF40O75150 1001 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 KRT83P78385 493 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 KCNB1Q14721 858 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 PFKFB3Q16875 520 aaPredicted RBP22.86■■□□□ 1.25
TMED4-201ENST00000289577 CCDC152Q4G0S7 254 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 CCDC122Q5T0U0 273 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 EHBP1Q8NDI1 1231 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 ADAMTS3O15072 1205 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 CHRNDQ07001 517 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 ABCF2Q9UG63 623 aa22.86■■□□□ 1.25
TMED4-201ENST00000289577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.86■■□□□ 1.25
TMED4-201ENST00000289577 STAT6P42226 847 aa22.85■■□□□ 1.25
TMED4-201ENST00000289577 PMS1P54277 932 aaKnown RBP22.85■■□□□ 1.25
TMED4-201ENST00000289577 CKAP4Q07065 602 aaKnown RBP22.85■■□□□ 1.25
TMED4-201ENST00000289577 COG1Q8WTW3 980 aa22.85■■□□□ 1.25
TMED4-201ENST00000289577 RREB1Q92766 1687 aa22.85■■□□□ 1.25
TMED4-201ENST00000289577 SEMA3FQ13275 785 aa22.85■■□□□ 1.25
TMED4-201ENST00000289577 TSR1Q2NL82 804 aaKnown RBP22.85■■□□□ 1.25
TMED4-201ENST00000289577 NAALADL2Q58DX5 795 aa22.85■■□□□ 1.25
TMED4-201ENST00000289577 TTYH3Q9C0H2 523 aa22.85■■□□□ 1.25
TMED4-201ENST00000289577 DISC1Q9NRI5 854 aa22.85■■□□□ 1.25
TMED4-201ENST00000289577 SRGNP10124 158 aa22.84■■□□□ 1.25
TMED4-201ENST00000289577 DNM2P50570 870 aa22.84■■□□□ 1.25
TMED4-201ENST00000289577 DYNLL1P63167 89 aaKnown RBP22.84■■□□□ 1.25
TMED4-201ENST00000289577 CTR9Q6PD62 1173 aa22.84■■□□□ 1.25
TMED4-201ENST00000289577 RSPH14Q9UHP6 348 aa22.84■■□□□ 1.25
TMED4-201ENST00000289577 KLRC4O43908 158 aa22.84■■□□□ 1.25
TMED4-201ENST00000289577 ORC4O43929 436 aa22.84■■□□□ 1.25
TMED4-201ENST00000289577 SRGAP2O75044 1071 aa22.84■■□□□ 1.25
TMED4-201ENST00000289577 VEGFAP15692 232 aaPredicted RBP22.84■■□□□ 1.25
TMED4-201ENST00000289577 AFAP1L1Q8TED9 768 aa22.84■■□□□ 1.25
TMED4-201ENST00000289577 TFR2Q9UP52 801 aa22.84■■□□□ 1.25
TMED4-201ENST00000289577 COL1A1P02452 1464 aaPredicted RBP22.83■■□□□ 1.25
TMED4-201ENST00000289577 KRT86O43790 486 aa22.83■■□□□ 1.25
TMED4-201ENST00000289577 MYL1P05976 194 aa22.83■■□□□ 1.25
TMED4-201ENST00000289577 JAKMIP2Q96AA8 810 aa22.83■■□□□ 1.25
TMED4-201ENST00000289577 ANO9A1A5B4 782 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 EIF5P55010 431 aaKnown RBP22.82■■□□□ 1.24
TMED4-201ENST00000289577 TTI2Q6NXR4 508 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 NOC3LQ8WTT2 800 aaKnown RBP22.82■■□□□ 1.24
TMED4-201ENST00000289577 PURBQ96QR8 312 aaKnown RBP22.82■■□□□ 1.24
TMED4-201ENST00000289577 RASSF10A6NK89 507 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 EIF3CLB5ME19 914 aaKnown RBP22.82■■□□□ 1.24
TMED4-201ENST00000289577 RHOBTB3O94955 611 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 CALML3P27482 149 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 CYLC1P35663 651 aaPredicted RBP22.82■■□□□ 1.24
TMED4-201ENST00000289577 TNNT3P45378 269 aaPredicted RBP22.82■■□□□ 1.24
TMED4-201ENST00000289577 KIAA1328Q86T90 577 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 CCDC170Q8IYT3 715 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 GOLGA6L1Q8N7Z2 621 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 RETREG2Q8NC44 543 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 GIMAP8Q8ND71 665 aaPredicted RBP22.82■■□□□ 1.24
TMED4-201ENST00000289577 EIF3CQ99613 913 aaKnown RBP22.82■■□□□ 1.24
TMED4-201ENST00000289577 NUP58Q9BVL2 599 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 LACRTQ9GZZ8 138 aa22.82■■□□□ 1.24
TMED4-201ENST00000289577 RNF216Q9NWF9 866 aaPredicted RBP22.82■■□□□ 1.24
TMED4-201ENST00000289577 RCCD1A6NED2 376 aa22.81■■□□□ 1.24
TMED4-201ENST00000289577 TRHP20396 242 aaPredicted RBP22.81■■□□□ 1.24
TMED4-201ENST00000289577 STIM1Q13586 685 aa22.81■■□□□ 1.24
TMED4-201ENST00000289577 ZNF384Q8TF68 577 aa22.81■■□□□ 1.24
TMED4-201ENST00000289577 EFCC1Q9HA90 598 aa22.81■■□□□ 1.24
TMED4-201ENST00000289577 GNL3LQ9NVN8 582 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms