RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
C9orf43-201ENST00000288462 NAT10Q9H0A0 1025 aaKnown RBP11.62□□□□□ -0.55
C9orf43-201ENST00000288462 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
C9orf43-201ENST00000288462 POLD1P28340 1107 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 PNOCQ13519 176 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 SHROOM1Q2M3G4 852 aaPredicted RBP11.61□□□□□ -0.55
C9orf43-201ENST00000288462 ARL6IP4Q66PJ3 421 aaKnown RBP11.61□□□□□ -0.55
C9orf43-201ENST00000288462 PPP1R18Q6NYC8 613 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 TMEM179Q6ZVK1 233 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 USP49Q70CQ1 688 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 KRT25Q7Z3Z0 450 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 NIM1KQ8IY84 436 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 MTMR14Q8NCE2 650 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 TRIM34Q9BYJ4 488 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 UBA5Q9GZZ9 404 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 KANSL2Q9H9L4 492 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 C6orf50Q9HD87 102 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 TMOD2Q9NZR1 351 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 CNTNAP1P78357 1384 aa11.61□□□□□ -0.55
C9orf43-201ENST00000288462 POLR2DO15514 142 aaKnown RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 GNA11P29992 359 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 MCM7P33993 719 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 ZRSR1Q15695 479 aaKnown RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 SPDYE2Q495Y8 402 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 PLA2G4DQ86XP0 818 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 AGBL3Q8NEM8 1001 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 DCAF4Q8WV16 495 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 SYMPKQ92797 1274 aaKnown RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 MTMR8Q96EF0 704 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 SERTAD1Q9UHV2 236 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 HOOK1Q9UJC3 728 aaKnown RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 ZKSCAN5Q9Y2L8 839 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 A0A087X0B3 334 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 SMCO2A6NFE2 343 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 GOLGA6L19H0YKK7 550 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 EEF2P13639 858 aaKnown RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 CLCN1P35523 988 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 POSTNQ15063 836 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 DLGAP5Q15398 846 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 IL17AQ16552 155 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 DALRD3Q5D0E6 543 aaKnown RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 NT5DC1Q5TFE4 455 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 FKBP1CQ5VVH2 108 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 KANK3Q6NY19 840 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 SIAH1Q8IUQ4 282 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 ZBED3Q96IU2 234 aaPredicted RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 CSRNP1Q96S65 589 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 JMJD4Q9H9V9 463 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 GPCPD1Q9NPB8 672 aa11.6□□□□□ -0.55
C9orf43-201ENST00000288462 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 ZNF70Q9UC06 446 aaPredicted RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 HERC5Q9UII4 1024 aaKnown RBP11.6□□□□□ -0.55
C9orf43-201ENST00000288462 PNMA6FA0A0J9YX94 578 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 VWA3AA6NCI4 1184 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 BIN1O00499 593 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 FOXN1O15353 648 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 PTMAP06454 111 aaKnown RBP11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ZNF75DP51815 510 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ICA1Q05084 483 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 SEPT2Q15019 361 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 CCDC96Q2M329 555 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ABCB5Q2M3G0 1257 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ADGRF4Q8IZF3 695 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 OGFOD1Q8N543 542 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 AOPEPQ8N6M6 819 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 GMCL1P1Q8NEA9 526 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 FAM151AQ8WW52 585 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 EPSTI1Q96J88 318 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 TAOK3Q9H2K8 898 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 VAT1LQ9HCJ6 419 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 SYNPO2Q9UMS6 1093 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ZBTB12Q9Y330 459 aaPredicted RBP11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ATAD5Q96QE3 1844 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 LAD1O00515 517 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 CDC25BP30305 580 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ATP2B2Q01814 1243 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 CXCL9Q07325 125 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 ORC2Q13416 577 aaPredicted RBP11.59□□□□□ -0.55
C9orf43-201ENST00000288462 NONOQ15233 471 aaKnown RBP eCLIP11.59□□□□□ -0.55
C9orf43-201ENST00000288462 INF2Q27J81 1249 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 TTBK2Q6IQ55 1244 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 SH3RF1Q7Z6J0 888 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 PCDHA5Q9Y5H7 936 aa11.59□□□□□ -0.55
C9orf43-201ENST00000288462 CLRN2A0PK11 232 aa11.58□□□□□ -0.56
C9orf43-201ENST00000288462 BECN2A8MW95 431 aa11.58□□□□□ -0.56
C9orf43-201ENST00000288462 TCP10L2B9ZVM9 353 aa11.58□□□□□ -0.56
C9orf43-201ENST00000288462 NFKBIEO00221 500 aa11.58□□□□□ -0.56
C9orf43-201ENST00000288462 PPP1R11O60927 126 aaPredicted RBP11.58□□□□□ -0.56
C9orf43-201ENST00000288462 GDF11O95390 407 aa11.58□□□□□ -0.56
C9orf43-201ENST00000288462 LONP1P36776 959 aaKnown RBP11.58□□□□□ -0.56
C9orf43-201ENST00000288462 PRPHP41219 470 aa11.58□□□□□ -0.56
C9orf43-201ENST00000288462 SARSP49591 514 aaKnown RBP11.58□□□□□ -0.56
C9orf43-201ENST00000288462 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms