RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 ZC3H13Q5T200 1668 aaKnown RBP9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 NEXMIFQ5QGS0 1516 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 E9PMD0 336 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 RGS16O15492 202 aaPredicted RBP9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 KRT9P35527 623 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 ARHGEF25Q86VW2 580 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 ABCF2Q9UG63 623 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 SLC13A4Q9UKG4 626 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 MAP3K15Q6ZN16 1313 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 BCRP11274 1271 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 PHEXP78562 749 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 SPATA1Q5VX52 437 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 FBXO18Q8NFZ0 1043 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 DHTKD1Q96HY7 919 aaPredicted RBP9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 PDE6CP51160 858 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 NNTQ13423 1086 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 KRT71Q3SY84 523 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 IFIT1BQ5T764 474 aaKnown RBP9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 PPANQ9NQ55 473 aaKnown RBP9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 MAGI2Q86UL8 1455 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 LONRF2Q1L5Z9 754 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 KDRP35968 1356 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 A0A1B0GW55 424 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 MYO1CO00159 1063 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 DUX4L2P0CJ85 424 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 DUX4L3P0CJ86 424 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 DUX4L4P0CJ87 422 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 DUX4L5P0CJ88 424 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 DUX4L6P0CJ89 424 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 DUX4L7P0CJ90 424 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 IFNA8P32881 189 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 CDC37Q16543 378 aaPredicted RBP9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 TEX2Q8IWB9 1127 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 MSL3Q8N5Y2 521 aaKnown RBP9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 DUX4Q9UBX2 424 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 RCOR1Q9UKL0 485 aa9.19□□□□□ -0.94
CACNA1D-201ENST00000288139 RP1P56715 2156 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 SLC26A4O43511 780 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 SMIM24O75264 130 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 EPB41P11171 864 aaKnown RBP9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 KRT10P13645 584 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 LIN9Q5TKA1 542 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 BCAS4Q8TDM0 211 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 NOP14P78316 857 aaKnown RBP9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 ARHGAP4P98171 946 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 EDEM3Q9BZQ6 932 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 TRIM4Q9C037 500 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 FAM204AQ9H8W3 233 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 XAB2Q9HCS7 855 aaKnown RBP9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 CLTCL1P53675 1640 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 GRIN1Q05586 938 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 MPNDQ8N594 471 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 APPBP2Q92624 585 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 L3MBTL3Q96JM7 780 aaPredicted RBP9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 TTC1Q99614 292 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 AMOTL2Q9Y2J4 779 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 UBE4BO95155 1302 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 SERPINI2O75830 405 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 COG7P83436 770 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 ANKRD20A3Q5VUR7 823 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 PPP4R3CPQ6ZMV5 832 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 VSIG1Q86XK7 387 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 CENPKQ9BS16 269 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 MAP3K2Q9Y2U5 619 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 ERVK-7P63135 1459 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 CITO14578 2027 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 TCP11Q8WWU5 503 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 SH3GL3Q99963 347 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 DDX21Q9NR30 783 aaKnown RBP eCLIP9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 CCPG1Q9ULG6 757 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 PLS1Q14651 629 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 FAM186BQ8IYM0 893 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 PASKQ96RG2 1323 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 CAV1Q03135 178 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 NOSTRINQ8IVI9 506 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 OLFM3Q96PB7 478 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 MTMR6Q9Y217 621 aa9.18□□□□□ -0.94
CACNA1D-201ENST00000288139 RHOXF2BP0C7M4 288 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 PPP1R7Q15435 360 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 RHOXF2Q9BQY4 288 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 NOP53Q9NZM5 478 aaKnown RBP9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 SENP1Q9P0U3 644 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 GTPBP6O43824 516 aaPredicted RBP9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 SMARCA5O60264 1052 aaPredicted RBP9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 FOXP1Q9H334 677 aaPredicted RBP9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 SFMBT1Q9UHJ3 866 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 PSMA3P25788 255 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 RIC8AQ9NPQ8 531 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 EXOC7Q9UPT5 735 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 UBXN8O00124 270 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 CALUO43852 315 aaPredicted RBP9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 DNA2P51530 1060 aa9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 MRPS25P82663 173 aaKnown RBP9.17□□□□□ -0.94
CACNA1D-201ENST00000288139 SLC39A14Q15043 492 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms