RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 BMP3P12645 472 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 KRT2P35908 639 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 GNAQP50148 359 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 SOCS7O14512 581 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
ACER3-201ENST00000278544 ASNSP08243 561 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 HMGCS2P54868 508 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 ZRSR1Q15695 479 aaKnown RBP15.3■□□□□ 0.04
ACER3-201ENST00000278544 NYAP2Q9P242 653 aa15.3■□□□□ 0.04
ACER3-201ENST00000278544 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
ACER3-201ENST00000278544 MCM7P33993 719 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 FKBP1CQ5VVH2 108 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 APOBEC3FQ8IUX4 373 aaKnown RBP15.29■□□□□ 0.04
ACER3-201ENST00000278544 PICK1Q9NRD5 415 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 A0A1B0GVL5 298 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 SYCE3A1L190 88 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L15C9J2P7 530 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L13C9JLJ4 530 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L11C9JVI0 530 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L18D6R9N7 530 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L22D6RA61 530 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L17D6RBQ6 530 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L19D6RCP7 530 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L20D6RJB6 530 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 GRIN1Q05586 938 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L24Q0WX57 530 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 INF2Q27J81 1249 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 USP17L6PQ6QN14 398 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 NMRK2Q9NPI5 230 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 QRICH1Q2TAL8 776 aa15.29■□□□□ 0.04
ACER3-201ENST00000278544 SMCHD1A6NHR9 2005 aa15.28■□□□□ 0.04
ACER3-201ENST00000278544 PSME4Q14997 1843 aa15.28■□□□□ 0.04
ACER3-201ENST00000278544 FOCADQ5VW36 1801 aa15.28■□□□□ 0.04
ACER3-201ENST00000278544 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
ACER3-201ENST00000278544 TOB1P50616 345 aaPredicted RBP15.28■□□□□ 0.04
ACER3-201ENST00000278544 CDC37Q16543 378 aaPredicted RBP15.28■□□□□ 0.04
ACER3-201ENST00000278544 ZNF396Q96N95 335 aaPredicted RBP15.28■□□□□ 0.04
ACER3-201ENST00000278544 PHF20Q9BVI0 1012 aa15.28■□□□□ 0.04
ACER3-201ENST00000278544 ELP3Q9H9T3 547 aa15.28■□□□□ 0.04
ACER3-201ENST00000278544 HOXA13P31271 388 aaPredicted RBP15.28■□□□□ 0.04
ACER3-201ENST00000278544 ASPRV1Q53RT3 343 aa15.28■□□□□ 0.04
ACER3-201ENST00000278544 CFAP45Q9UL16 551 aa15.28■□□□□ 0.04
ACER3-201ENST00000278544 MYH6P13533 1939 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 STXBP3O00186 592 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 CDC25AP30304 524 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 UBXN2AP68543 259 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 PPP2R5BQ15173 497 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 NPY5RQ15761 445 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 ANO1Q5XXA6 986 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 CKAP2LQ8IYA6 745 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 GJA10Q969M2 543 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 TAF1DQ9H5J8 278 aaPredicted RBP15.27■□□□□ 0.04
ACER3-201ENST00000278544 BRMS1Q9HCU9 246 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 PCDHA1Q9Y5I3 950 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 POTECB2RU33 542 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 METTL16Q86W50 562 aaKnown RBP15.27■□□□□ 0.04
ACER3-201ENST00000278544 PDILTQ8N807 584 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 OTUD5Q96G74 571 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 MYH4Q9Y623 1939 aa15.27■□□□□ 0.04
ACER3-201ENST00000278544 BLIDQ8IZY5 108 aa15.27■□□□□ 0.03
ACER3-201ENST00000278544 SCAND2PQ9GZW5 306 aaPredicted RBP15.27■□□□□ 0.03
ACER3-201ENST00000278544 PCDHA7Q9UN72 937 aa15.27■□□□□ 0.03
ACER3-201ENST00000278544 CCDC194A0A1B0GVG4 234 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 RCAN1P53805 252 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 DCAF15Q66K64 600 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 FCHSD1Q86WN1 690 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 TBC1D5Q92609 795 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 DACT1Q9NYF0 836 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 SPTLC2O15270 562 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 NR1I2O75469 434 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 FLOT1O75955 427 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 LETM2Q2VYF4 491 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 CLEC17AQ6ZS10 378 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 PRR12Q9ULL5 1215 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 TMX2Q9Y320 296 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 PLIN4Q96Q06 1357 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 GRM1Q13255 1194 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 CCAR1Q8IX12 1150 aaKnown RBP15.26■□□□□ 0.03
ACER3-201ENST00000278544 RNF214Q8ND24 703 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 WNK4Q96J92 1243 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 GOPCQ9HD26 462 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 BARHL2Q9NY43 387 aa15.26■□□□□ 0.03
ACER3-201ENST00000278544 STAT2P52630 851 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 VGLL4Q14135 290 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 GPATCH4Q5T3I0 446 aaKnown RBP15.25■□□□□ 0.03
ACER3-201ENST00000278544 SYDE2Q5VT97 1194 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 SPZ1Q9BXG8 430 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 VCPKMTQ9H867 229 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 USP2O75604 605 aaPredicted RBP15.25■□□□□ 0.03
ACER3-201ENST00000278544 SNHG28P0DPA3 235 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 UBE2HP62256 183 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 BRAPQ7Z569 592 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 FSIP1Q8NA03 581 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 LINC00301Q8NCQ3 95 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 KLRG1Q96E93 195 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 CDCA5Q96FF9 252 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 U2AF2P26368 475 aaKnown RBP eCLIP15.25■□□□□ 0.033e-6■■■□□ 15.4
ACER3-201ENST00000278544 KLHL40Q2TBA0 621 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 SUPT20HL1Q3ZLR7 823 aa15.25■□□□□ 0.03
ACER3-201ENST00000278544 GOLPH3LQ9H4A5 285 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms