RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SHISA2Q6UWI4 295 aa12.39□□□□□ -0.43
LRTM1-201ENST00000273286 KRT26Q7Z3Y9 468 aa12.39□□□□□ -0.43
LRTM1-201ENST00000273286 FMR1NBQ8N0W7 255 aaPredicted RBP12.39□□□□□ -0.43
LRTM1-201ENST00000273286 SERPINA10Q9UK55 444 aa12.39□□□□□ -0.43
LRTM1-201ENST00000273286 VIL1P09327 827 aaKnown RBP12.38□□□□□ -0.43
LRTM1-201ENST00000273286 HUNKP57058 714 aa12.38□□□□□ -0.43
LRTM1-201ENST00000273286 GRIK5Q16478 980 aa12.38□□□□□ -0.43
LRTM1-201ENST00000273286 RSPO4Q2I0M5 234 aaPredicted RBP12.38□□□□□ -0.43
LRTM1-201ENST00000273286 FAM26DQ5JW98 314 aa12.38□□□□□ -0.43
LRTM1-201ENST00000273286 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
LRTM1-201ENST00000273286 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
LRTM1-201ENST00000273286 CLP1Q92989 425 aaKnown RBP12.38□□□□□ -0.43
LRTM1-201ENST00000273286 CDC5LQ99459 802 aaKnown RBP12.38□□□□□ -0.43
LRTM1-201ENST00000273286 MYD88Q99836 296 aa12.38□□□□□ -0.43
LRTM1-201ENST00000273286 METTL22Q9BUU2 404 aaPredicted RBP12.38□□□□□ -0.43
LRTM1-201ENST00000273286 PHAXQ9H814 394 aaKnown RBP12.38□□□□□ -0.43
LRTM1-201ENST00000273286 XDHP47989 1333 aa12.38□□□□□ -0.43
LRTM1-201ENST00000273286 TNFRSF10BO14763 440 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 UFL1O94874 794 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 PSAPP07602 524 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 ITGB7P26010 798 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 NEXNQ0ZGT2 675 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 MBTPS1Q14703 1052 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 KIF4BQ2VIQ3 1234 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 TBC1D10BQ4KMP7 808 aaPredicted RBP12.37□□□□□ -0.43
LRTM1-201ENST00000273286 USP48Q86UV5 1035 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 STK31Q9BXU1 1019 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 SMG9Q9H0W8 520 aaKnown RBP12.37□□□□□ -0.43
LRTM1-201ENST00000273286 GBA2Q9HCG7 927 aaPredicted RBP12.37□□□□□ -0.43
LRTM1-201ENST00000273286 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 ELL2O00472 640 aaPredicted RBP12.37□□□□□ -0.43
LRTM1-201ENST00000273286 MMP20O60882 483 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 AOC2O75106 756 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 ATP2B4P23634 1241 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 MMP14P50281 582 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 ADGRE1Q14246 886 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 RGMBQ6NW40 437 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
LRTM1-201ENST00000273286 FKBP1BP68106 108 aa12.36□□□□□ -0.43
LRTM1-201ENST00000273286 TRIP4Q15650 581 aaPredicted RBP12.36□□□□□ -0.43
LRTM1-201ENST00000273286 CCDC27Q2M243 656 aa12.36□□□□□ -0.43
LRTM1-201ENST00000273286 WFDC8Q8IUA0 241 aa12.36□□□□□ -0.43
LRTM1-201ENST00000273286 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
LRTM1-201ENST00000273286 LENG1Q96BZ8 264 aaPredicted RBP12.36□□□□□ -0.43
LRTM1-201ENST00000273286 NSUN5Q96P11 429 aaKnown RBP12.36□□□□□ -0.43
LRTM1-201ENST00000273286 SEC31BQ9NQW1 1179 aa12.36□□□□□ -0.43
LRTM1-201ENST00000273286 SAGE1Q9NXZ1 904 aa12.36□□□□□ -0.43
LRTM1-201ENST00000273286 SHTN1A0MZ66 631 aa12.35□□□□□ -0.43
LRTM1-201ENST00000273286 CTSWP56202 376 aa12.35□□□□□ -0.43
LRTM1-201ENST00000273286 ZNF280AP59817 542 aaPredicted RBP12.35□□□□□ -0.43
LRTM1-201ENST00000273286 NRG1Q02297 640 aaPredicted RBP12.35□□□□□ -0.43
LRTM1-201ENST00000273286 NKAPLQ5M9Q1 402 aa12.35□□□□□ -0.43
LRTM1-201ENST00000273286 C8orf58Q8NAV2 365 aa12.35□□□□□ -0.43
LRTM1-201ENST00000273286 TTC9Q92623 222 aa12.35□□□□□ -0.43
LRTM1-201ENST00000273286 GGA3Q9NZ52 723 aa12.35□□□□□ -0.43
LRTM1-201ENST00000273286 MAP3K2Q9Y2U5 619 aa12.35□□□□□ -0.43
LRTM1-201ENST00000273286 PITPNM2Q9BZ72 1349 aa12.35□□□□□ -0.43
LRTM1-201ENST00000273286 PSME4Q14997 1843 aa12.34□□□□□ -0.43
LRTM1-201ENST00000273286 DTWD1Q8N5C7 304 aa12.34□□□□□ -0.43
LRTM1-201ENST00000273286 BSDC1Q9NW68 430 aaPredicted RBP12.34□□□□□ -0.43
LRTM1-201ENST00000273286 MYO3BQ8WXR4 1341 aa12.34□□□□□ -0.43
LRTM1-201ENST00000273286 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
LRTM1-201ENST00000273286 SCN9AQ15858 1988 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 PI4KAP2A4QPH2 592 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 J3QW42 95 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 ZEB1P37275 1124 aaPredicted RBP12.33□□□□□ -0.44
LRTM1-201ENST00000273286 ZNF157P51786 506 aaPredicted RBP12.33□□□□□ -0.44
LRTM1-201ENST00000273286 TXNRD3Q86VQ6 643 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 PI4KAP1Q8N8J0 262 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 PLD4Q96BZ4 506 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 KCNQ5Q9NR82 932 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 FAM13BQ9NYF5 915 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 IL16Q14005 1332 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 COL4A1P02462 1669 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 MYH3P11055 1940 aa12.33□□□□□ -0.44
LRTM1-201ENST00000273286 GHRHP01286 108 aa12.32□□□□□ -0.44
LRTM1-201ENST00000273286 SOX18P35713 384 aa12.32□□□□□ -0.44
LRTM1-201ENST00000273286 ZAP70P43403 619 aa12.32□□□□□ -0.44
LRTM1-201ENST00000273286 RGS19P49795 217 aa12.32□□□□□ -0.44
LRTM1-201ENST00000273286 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
LRTM1-201ENST00000273286 MYH16Q9H6N6 1097 aa12.32□□□□□ -0.44
LRTM1-201ENST00000273286 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
LRTM1-201ENST00000273286 POLR2AP24928 1970 aaKnown RBP12.31□□□□□ -0.44
LRTM1-201ENST00000273286 CCDC85CA6NKD9 419 aa12.31□□□□□ -0.44
LRTM1-201ENST00000273286 FAM155AB1AL88 458 aaPredicted RBP12.31□□□□□ -0.44
LRTM1-201ENST00000273286 ADM5C9JUS6 153 aa12.31□□□□□ -0.44
LRTM1-201ENST00000273286 DYRK3O43781 588 aa12.31□□□□□ -0.44
LRTM1-201ENST00000273286 IGHMBP2P38935 993 aaKnown RBP12.31□□□□□ -0.44
LRTM1-201ENST00000273286 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
LRTM1-201ENST00000273286 XP32Q5T750 250 aa12.31□□□□□ -0.44
LRTM1-201ENST00000273286 ANGEL2Q5VTE6 544 aaKnown RBP12.31□□□□□ -0.44
LRTM1-201ENST00000273286 PIK3R5Q8WYR1 880 aa12.31□□□□□ -0.44
LRTM1-201ENST00000273286 CDCA5Q96FF9 252 aa12.31□□□□□ -0.44
LRTM1-201ENST00000273286 GMLQ99445 158 aa12.31□□□□□ -0.44
LRTM1-201ENST00000273286 COA1Q9GZY4 146 aa12.31□□□□□ -0.44
LRTM1-201ENST00000273286 LEMD3Q9Y2U8 911 aa12.31□□□□□ -0.44
LRTM1-201ENST00000273286 IGKV5-2P06315 115 aa12.3□□□□□ -0.44
LRTM1-201ENST00000273286 CCT4P50991 539 aaKnown RBP12.3□□□□□ -0.44
LRTM1-201ENST00000273286 STRIP1Q5VSL9 837 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms