RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 NMIQ13287 307 aaPredicted RBP17.23■□□□□ 0.35
UBR3-201ENST00000272793 RAB3GAP1Q15042 981 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 BMP2KLQ5H9B9 411 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 SNX19Q92543 992 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 STK25O00506 426 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 KLHL29Q96CT2 875 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 HINFPQ9BQA5 517 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 TRIM15Q9C019 465 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 MRPL44Q9H9J2 332 aaKnown RBP17.23■□□□□ 0.35
UBR3-201ENST00000272793 LZTS3O60299 673 aaPredicted RBP17.23■□□□□ 0.35
UBR3-201ENST00000272793 FAM133BQ5BKY9 247 aaKnown RBP17.23■□□□□ 0.35
UBR3-201ENST00000272793 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
UBR3-201ENST00000272793 SYNJ2BP-COX16A0A087WUM0 186 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 TSPY1Q01534 308 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 INAQ16352 499 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 RINT1Q6NUQ1 792 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 COX16Q9P0S2 106 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 HACE1Q8IYU2 909 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 SH2D4AQ9H788 454 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 SUN1O94901 812 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 GNA11P29992 359 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 TRPC1P48995 793 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 RNF169Q8NCN4 708 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 STAM2O75886 525 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 KRT77Q7Z794 578 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 CATSPER3Q86XQ3 398 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 STX19Q8N4C7 294 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 PHKBQ93100 1093 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 NCLNQ969V3 563 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 TLK2Q86UE8 772 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 TYW5A2RUC4 315 aaKnown RBP17.22■□□□□ 0.35
UBR3-201ENST00000272793 APOA1P02647 267 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 DYDC2Q96IM9 177 aa17.22■□□□□ 0.35
UBR3-201ENST00000272793 STX18Q9P2W9 335 aaKnown RBP17.22■□□□□ 0.35
UBR3-201ENST00000272793 ARHGAP6O43182 974 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 YARSP54577 528 aaKnown RBP17.21■□□□□ 0.35
UBR3-201ENST00000272793 PTPROQ16827 1216 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 TAB3Q8N5C8 712 aaPredicted RBP17.21■□□□□ 0.35
UBR3-201ENST00000272793 METTL13Q8N6R0 699 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 CAPS2Q9BXY5 557 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 MAIP1Q8WWC4 291 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 SH3GL2Q99962 352 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 CAB39Q9Y376 341 aaPredicted RBP17.21■□□□□ 0.35
UBR3-201ENST00000272793 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 APOBRQ0VD83 1088 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 ERBINQ96RT1 1412 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 GRAMD1BQ3KR37 738 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 POLA1P09884 1462 aaPredicted RBP17.21■□□□□ 0.35
UBR3-201ENST00000272793 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 IFT88Q13099 833 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 TUBB2AQ13885 445 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 PPP2R5EQ16537 467 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 CDKL2Q92772 493 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 TUBB2BQ9BVA1 445 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 SLC7A5P2Q9GIP4 190 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 TNNI1P19237 187 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 NBPF20Q3BBV1 942 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 PPP1R14AQ96A00 147 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 FGFR1OP2Q9NVK5 253 aa17.21■□□□□ 0.35
UBR3-201ENST00000272793 ZNF653Q96CK0 615 aa17.21■□□□□ 0.34
UBR3-201ENST00000272793 UIMC1Q96RL1 719 aa17.21■□□□□ 0.34
UBR3-201ENST00000272793 JPH2Q9BR39 696 aaPredicted RBP17.21■□□□□ 0.34
UBR3-201ENST00000272793 POLKQ9UBT6 870 aa17.21■□□□□ 0.34
UBR3-201ENST00000272793 EFCAB8A8MWE9 144 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 GOLGA8RI6L899 631 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 TBL3Q12788 808 aaKnown RBP17.2■□□□□ 0.34
UBR3-201ENST00000272793 TRIM14Q14142 442 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 ZMYND8Q9ULU4 1186 aaPredicted RBP17.2■□□□□ 0.34
UBR3-201ENST00000272793 EXOC7Q9UPT5 735 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 CFLARO15519 480 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 PDE4DQ08499 809 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 ZC3H18Q86VM9 953 aaKnown RBP17.2■□□□□ 0.34
UBR3-201ENST00000272793 MMS19Q96T76 1030 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 AMFRQ9UKV5 643 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 NBPF26B4DH59 902 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 SGK1O00141 431 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 NBPF14Q5TI25 921 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 NBPF15Q8N660 670 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 PAPOLBQ9NRJ5 636 aaKnown RBP17.2■□□□□ 0.34
UBR3-201ENST00000272793 YWHAHQ04917 246 aaPredicted RBP17.2■□□□□ 0.34
UBR3-201ENST00000272793 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.2■□□□□ 0.34
UBR3-201ENST00000272793 PACSIN2Q9UNF0 486 aaPredicted RBP17.2■□□□□ 0.34
UBR3-201ENST00000272793 SESN1Q9Y6P5 492 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 ZNF692Q9BU19 519 aaPredicted RBP17.2■□□□□ 0.34
UBR3-201ENST00000272793 WDR47O94967 919 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 IMPDH2P12268 514 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 PTK2BQ14289 1009 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
UBR3-201ENST00000272793 MTRQ99707 1265 aa17.19■□□□□ 0.34
UBR3-201ENST00000272793 DKC1O60832 514 aaKnown RBP eCLIP17.19■□□□□ 0.343e-13■■■■■ 32.2
UBR3-201ENST00000272793 PRDM1O75626 825 aa17.19■□□□□ 0.34
UBR3-201ENST00000272793 GABPB1Q06547 395 aaPredicted RBP17.19■□□□□ 0.34
UBR3-201ENST00000272793 CCDC142Q17RM4 750 aa17.19■□□□□ 0.34
UBR3-201ENST00000272793 GRK7Q8WTQ7 553 aa17.19■□□□□ 0.34
UBR3-201ENST00000272793 SERPINI1Q99574 410 aa17.19■□□□□ 0.34
UBR3-201ENST00000272793 UPF3AQ9H1J1 476 aaKnown RBP17.19■□□□□ 0.34
UBR3-201ENST00000272793 ANGPTL2Q9UKU9 493 aa17.19■□□□□ 0.34
UBR3-201ENST00000272793 SYNRGQ9UMZ2 1314 aa17.19■□□□□ 0.34
UBR3-201ENST00000272793 FLOT1O75955 427 aa17.19■□□□□ 0.34
UBR3-201ENST00000272793 GRK2P25098 689 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms