RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 TRIM58Q8NG06 486 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 FERMT2Q96AC1 680 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 ZC3H12CQ9C0D7 883 aaKnown RBP13.37□□□□□ -0.27
ERBB2-201ENST00000269571 LRRD1A4D1F6 860 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 B4DLN1 442 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
ERBB2-201ENST00000269571 EIF6P56537 245 aaKnown RBP13.37□□□□□ -0.27
ERBB2-201ENST00000269571 PLCB3Q01970 1234 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 CALCOCO2Q13137 446 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 POLA2Q14181 598 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 FAM47AQ5JRC9 791 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 AKNAD1Q5T1N1 836 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 APOA5Q6Q788 366 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 SAP30BPQ9UHR5 308 aaKnown RBP13.37□□□□□ -0.27
ERBB2-201ENST00000269571 CCNL1Q9UK58 526 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-201ENST00000269571 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
ERBB2-201ENST00000269571 TADA3O75528 432 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 PDCLQ13371 301 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 PPP4R3AQ6IN85 833 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 STXBP4Q6ZWJ1 553 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 TEX11Q8IYF3 940 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 OSBP2Q969R2 916 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 SPDL1Q96EA4 605 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 IFT74Q96LB3 600 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 TAF6LQ9Y6J9 622 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 ABCA9Q8IUA7 1624 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 ACTN3Q08043 901 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-201ENST00000269571 EHHADHQ08426 723 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 TRIM68Q6AZZ1 485 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 CCDC77Q9BR77 488 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 ZMYM6O95789 1325 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 PSMD2Q13200 908 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 PUM3Q15397 648 aaKnown RBP13.36□□□□□ -0.27
ERBB2-201ENST00000269571 TSNAXIP1Q2TAA8 658 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 FBXW10Q5XX13 1052 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 INTS8Q75QN2 995 aaKnown RBP13.36□□□□□ -0.27
ERBB2-201ENST00000269571 GSTA5Q7RTV2 222 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 VSIG1Q86XK7 387 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 ANKRD42Q8N9B4 389 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 FANCBQ8NB91 859 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 RRP36Q96EU6 259 aaKnown RBP13.36□□□□□ -0.27
ERBB2-201ENST00000269571 EPSTI1Q96J88 318 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 ASAP1Q9ULH1 1129 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 HYOU1Q9Y4L1 999 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 GOLGA8KD6RF30 607 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 M0R2C6 588 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 DESP17661 470 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 IFNAR2P48551 515 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 ZMYM1Q5SVZ6 1142 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 FOXN1O15353 648 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 GNA11P29992 359 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 SETDB1Q15047 1291 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 SDR42E1Q8WUS8 393 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 TCP11Q8WWU5 503 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 KRT12Q99456 494 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.36□□□□□ -0.27
ERBB2-201ENST00000269571 EPB41L5Q9HCM4 733 aa13.36□□□□□ -0.27
ERBB2-201ENST00000269571 UTP11Q9Y3A2 253 aaKnown RBP13.36□□□□□ -0.27
ERBB2-201ENST00000269571 CORO7P57737 925 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 RASSF7Q02833 373 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 STMN4Q9H169 189 aaPredicted RBP13.35□□□□□ -0.27
ERBB2-201ENST00000269571 COPRSQ9NQ92 184 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 ERVV-2B6SEH9 535 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 TEX33O43247 280 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 LUC7L3O95232 432 aaKnown RBP13.35□□□□□ -0.27
ERBB2-201ENST00000269571 CNNM4Q6P4Q7 775 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 ATP6V0A2Q9Y487 856 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 SPHKAPQ2M3C7 1700 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 EEF2P13639 858 aaKnown RBP13.35□□□□□ -0.27
ERBB2-201ENST00000269571 DNM2P50570 870 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 ASIC2Q16515 512 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 PEX26Q7Z412 305 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 ENOX1Q8TC92 643 aaKnown RBP13.35□□□□□ -0.27
ERBB2-201ENST00000269571 BICD1Q96G01 975 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 EHMT1Q9H9B1 1298 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.35□□□□□ -0.27
ERBB2-201ENST00000269571 CROCC2H7BZ55 1655 aa13.35□□□□□ -0.27
ERBB2-201ENST00000269571 HERC4Q5GLZ8 1057 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-201ENST00000269571 C6orf163Q5TEZ5 329 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 SEPT14Q6ZU15 432 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 PPFIBP2Q8ND30 876 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 SUGCTQ9HAC7 445 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 SLC39A2Q9NP94 309 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 NKIRAS1Q9NYS0 192 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 AXIN2Q9Y2T1 843 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 AK9Q5TCS8 1911 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 SPDYE3A6NKU9 549 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
ERBB2-201ENST00000269571 ZNF804AQ7Z570 1209 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 CDCA7Q9BWT1 371 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-201ENST00000269571 YIPF3Q9GZM5 350 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 CCDC87Q9NVE4 849 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 AATFQ9NY61 560 aaKnown RBP eCLIP13.34□□□□□ -0.27
ERBB2-201ENST00000269571 HDAC6Q9UBN7 1215 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms