RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 MGAMO43451 1857 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 MSCO60682 206 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 NDUFB10O96000 172 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 CYBAP13498 195 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 CNGA1P29973 690 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 PDE1AP54750 535 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 AAMPQ13685 434 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 C7orf61Q8IZ16 206 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 EVI5LQ96CN4 794 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 CEP95Q96GE4 821 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 NUP88Q99567 741 aaPredicted RBP11.59□□□□□ -0.55
VPS41-201ENST00000265745 NAPBQ9H115 298 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 ZNF214Q9UL59 606 aaPredicted RBP11.59□□□□□ -0.55
VPS41-201ENST00000265745 SYNPO2Q9UMS6 1093 aa11.59□□□□□ -0.55
VPS41-201ENST00000265745 FOXP2O15409 715 aa11.58□□□□□ -0.56
VPS41-201ENST00000265745 PPARAQ07869 468 aa11.58□□□□□ -0.56
VPS41-201ENST00000265745 PRPF38AQ8NAV1 312 aaKnown RBP11.58□□□□□ -0.56
VPS41-201ENST00000265745 NEDD1Q8NHV4 660 aa11.58□□□□□ -0.56
VPS41-201ENST00000265745 MAML3Q96JK9 1138 aa11.58□□□□□ -0.56
VPS41-201ENST00000265745 YTHDC1Q96MU7 727 aaKnown RBP11.58□□□□□ -0.56
VPS41-201ENST00000265745 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.56
VPS41-201ENST00000265745 A0A1W2PPC1 479 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 TTLL1O95922 423 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 PGK2P07205 417 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 SLC3A2P08195 630 aaKnown RBP11.57□□□□□ -0.56
VPS41-201ENST00000265745 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
VPS41-201ENST00000265745 TFAP4Q01664 338 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 PDE4BQ07343 736 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 LRRC26Q2I0M4 334 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 FAM47AQ5JRC9 791 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 PRAMEF19Q5SWL8 479 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 CCDC129Q6ZRS4 1044 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 GMCL1P1Q8NEA9 526 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 DDX27Q96GQ7 796 aaKnown RBP11.57□□□□□ -0.56
VPS41-201ENST00000265745 MMP19Q99542 508 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 GDF15Q99988 308 aa11.57□□□□□ -0.56
VPS41-201ENST00000265745 ZMYND8Q9ULU4 1186 aaPredicted RBP11.57□□□□□ -0.56
VPS41-201ENST00000265745 DIS3Q9Y2L1 958 aaKnown RBP11.57□□□□□ -0.56
VPS41-201ENST00000265745 PLXNB2O15031 1838 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 DNM1LO00429 736 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 ATP2A1O14983 1001 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 SEPT4O43236 478 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 TSPY3P0CV98 308 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 TSPY8P0CW00 308 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 BMP8BP34820 402 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 COPB2P35606 906 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 KCTD2Q14681 263 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 ZNF792Q3KQV3 632 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 TICAM2Q86XR7 235 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 SMC5Q8IY18 1101 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 ARRDC4Q8NCT1 418 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 TEX13BQ9BXU2 312 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 SENP6Q9GZR1 1112 aaPredicted RBP11.56□□□□□ -0.56
VPS41-201ENST00000265745 INCENPQ9NQS7 918 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 HELLSQ9NRZ9 838 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 NRBP1Q9UHY1 535 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 FEM1BQ9UK73 627 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 RIPK3Q9Y572 518 aa11.56□□□□□ -0.56
VPS41-201ENST00000265745 ZBED4O75132 1171 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 SYN1P17600 705 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 ALX1Q15699 326 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 VPS53Q5VIR6 699 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 SLFN13Q68D06 897 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 SMYD5Q6GMV2 418 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 SNRNP48Q6IEG0 339 aaKnown RBP11.55□□□□□ -0.56
VPS41-201ENST00000265745 LRRC47Q8N1G4 583 aaKnown RBP11.55□□□□□ -0.56
VPS41-201ENST00000265745 FAM227BQ96M60 508 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 TINF2Q9BSI4 451 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 LNPKQ9C0E8 428 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 RWDD1Q9H446 243 aaPredicted RBP11.55□□□□□ -0.56
VPS41-201ENST00000265745 SLC38A10Q9HBR0 1119 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 IL17RBQ9NRM6 502 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 ANAPC4Q9UJX5 808 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.55□□□□□ -0.56
VPS41-201ENST00000265745 TACC3Q9Y6A5 838 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 NAV1Q8NEY1 1877 aa11.55□□□□□ -0.56
VPS41-201ENST00000265745 PLIN4Q96Q06 1357 aa11.54□□□□□ -0.56
VPS41-201ENST00000265745 IGHDP01880 384 aa11.54□□□□□ -0.56
VPS41-201ENST00000265745 FGRP09769 529 aa11.54□□□□□ -0.56
VPS41-201ENST00000265745 BMP3P12645 472 aa11.54□□□□□ -0.56
VPS41-201ENST00000265745 MAGEA10P43363 369 aaPredicted RBP11.54□□□□□ -0.56
VPS41-201ENST00000265745 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
VPS41-201ENST00000265745 MCMDC2Q4G0Z9 681 aa11.54□□□□□ -0.56
VPS41-201ENST00000265745 GJC2Q5T442 439 aaPredicted RBP11.54□□□□□ -0.56
VPS41-201ENST00000265745 ANO1Q5XXA6 986 aa11.54□□□□□ -0.56
VPS41-201ENST00000265745 CPXCR1Q8N123 301 aa11.54□□□□□ -0.56
VPS41-201ENST00000265745 KIFC2Q96AC6 838 aa11.54□□□□□ -0.56
VPS41-201ENST00000265745 RAVER2Q9HCJ3 691 aaKnown RBP11.54□□□□□ -0.56
VPS41-201ENST00000265745 ARIH1Q9Y4X5 557 aaPredicted RBP11.54□□□□□ -0.56
VPS41-201ENST00000265745 DNAJC25-GNG10A0A024R161 153 aa11.53□□□□□ -0.56
VPS41-201ENST00000265745 A0A0D9SFI3 127 aa11.53□□□□□ -0.56
VPS41-201ENST00000265745 ORC4O43929 436 aa11.53□□□□□ -0.56
VPS41-201ENST00000265745 FGAP02671 866 aa11.53□□□□□ -0.56
VPS41-201ENST00000265745 ZNF865P0CJ78 1059 aaPredicted RBP11.53□□□□□ -0.56
VPS41-201ENST00000265745 TAL1P17542 331 aaPredicted RBP11.53□□□□□ -0.56
VPS41-201ENST00000265745 MCCP23508 829 aa11.53□□□□□ -0.56
VPS41-201ENST00000265745 NOVP48745 357 aa11.53□□□□□ -0.56
VPS41-201ENST00000265745 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms