RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 TEX33O43247 280 aa11.87□□□□□ -0.51
COMMD9-201ENST00000263401 LETM2Q2VYF4 491 aa11.87□□□□□ -0.51
COMMD9-201ENST00000263401 CCAR2Q8N163 923 aaKnown RBP11.87□□□□□ -0.51
COMMD9-201ENST00000263401 BARHL2Q9NY43 387 aa11.87□□□□□ -0.51
COMMD9-201ENST00000263401 CTNND2Q9UQB3 1225 aa11.87□□□□□ -0.51
COMMD9-201ENST00000263401 MPHOSPH10O00566 681 aaKnown RBP11.86□□□□□ -0.51
COMMD9-201ENST00000263401 SLC16A2P36021 539 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 ADKP55263 362 aaKnown RBP11.86□□□□□ -0.51
COMMD9-201ENST00000263401 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 PDXDC2PQ6P474 469 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 SH3RF1Q7Z6J0 888 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 TCP11L1Q9NUJ3 509 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 LRRC37AA6NMS7 1700 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 CDC42EP5Q6NZY7 148 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 TBC1D22AQ8WUA7 517 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 EEF2KMTQ96G04 330 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 PRIMPOLQ96LW4 560 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.86□□□□□ -0.51
COMMD9-201ENST00000263401 GDAQ9Y2T3 454 aa11.86□□□□□ -0.51
COMMD9-201ENST00000263401 V9GYY5 206 aaPredicted RBP11.86□□□□□ -0.51
COMMD9-201ENST00000263401 SMCO2A6NFE2 343 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 CEP135Q66GS9 1140 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 VSTM4Q8IW00 320 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 RASSF8Q8NHQ8 419 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 GJA10Q969M2 543 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 COA1Q9GZY4 146 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 TMX1Q9H3N1 280 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 MYH8P13535 1937 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 DYNC1I1O14576 645 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 CCNT1O60563 726 aaKnown RBP11.85□□□□□ -0.51
COMMD9-201ENST00000263401 TOP1P11387 765 aaKnown RBP11.85□□□□□ -0.51
COMMD9-201ENST00000263401 NPR1P16066 1061 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 PLCG2P16885 1265 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 ZNF18P17022 549 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 CALML3P27482 149 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 RBM5P52756 815 aaKnown RBP eCLIP11.85□□□□□ -0.51
COMMD9-201ENST00000263401 GSDMDP57764 484 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 MLKLQ8NB16 471 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
COMMD9-201ENST00000263401 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
COMMD9-201ENST00000263401 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 PPP1R3GB7ZBB8 358 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 PDHBP11177 359 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 DHX8Q14562 1220 aaKnown RBP11.85□□□□□ -0.51
COMMD9-201ENST00000263401 APOBEC3HQ6NTF7 200 aaKnown RBP11.85□□□□□ -0.51
COMMD9-201ENST00000263401 KCTD1Q719H9 257 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 NLGN1Q8N2Q7 840 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 IMPACTQ9P2X3 320 aa11.85□□□□□ -0.51
COMMD9-201ENST00000263401 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 TAL1P17542 331 aaPredicted RBP11.84□□□□□ -0.51
COMMD9-201ENST00000263401 RRAGBQ5VZM2 374 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 CPLX3Q8WVH0 158 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 PPP1R13BQ96KQ4 1090 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 MAP7D2Q96T17 732 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 MTMR4Q9NYA4 1195 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 FOCADQ5VW36 1801 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 SHMT1P34896 483 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 CCT6AP40227 531 aaKnown RBP11.84□□□□□ -0.51
COMMD9-201ENST00000263401 GNAQP50148 359 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 GABPAQ06546 454 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 PTPN14Q15678 1187 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 NAALADL2Q58DX5 795 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 KANK3Q6NY19 840 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 C2CD5Q86YS7 1000 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 ENOX1Q8TC92 643 aaKnown RBP11.84□□□□□ -0.51
COMMD9-201ENST00000263401 PRDM4Q9UKN5 801 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 SLX4Q8IY92 1834 aa11.84□□□□□ -0.51
COMMD9-201ENST00000263401 TRIM49BA6NDI0 452 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 NEMFO60524 1076 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 BMP15O95972 392 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 STAT6P42226 847 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 SNAP25P60880 206 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 UBE2SQ16763 222 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 SLF2Q8IX21 1173 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 FAM177A1Q8N128 213 aaPredicted RBP11.83□□□□□ -0.52
COMMD9-201ENST00000263401 IQUBQ8NA54 791 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 CCDC150Q8NCX0 1101 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 RRP36Q96EU6 259 aaKnown RBP11.83□□□□□ -0.52
COMMD9-201ENST00000263401 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 ZNF287Q9HBT7 754 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 NRXN2Q9P2S2 1712 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 TRAPPC10P48553 1259 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 DTHD1Q6ZMT9 781 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 POTEDQ86YR6 584 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 ELOA2Q8IYF1 753 aaPredicted RBP11.83□□□□□ -0.52
COMMD9-201ENST00000263401 TBCKQ8TEA7 893 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 SH3GLB2Q9NR46 395 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 SEC63Q9UGP8 760 aaKnown RBP11.83□□□□□ -0.52
COMMD9-201ENST00000263401 SERPINB13Q9UIV8 391 aa11.83□□□□□ -0.52
COMMD9-201ENST00000263401 DDTLA6NHG4 134 aaPredicted RBP11.82□□□□□ -0.52
COMMD9-201ENST00000263401 PPP1R11O60927 126 aaPredicted RBP11.82□□□□□ -0.52
COMMD9-201ENST00000263401 TECP42680 631 aa11.82□□□□□ -0.52
COMMD9-201ENST00000263401 CRKP46108 304 aa11.82□□□□□ -0.52
COMMD9-201ENST00000263401 TMED8Q6PL24 325 aaPredicted RBP11.82□□□□□ -0.52
COMMD9-201ENST00000263401 CCDC148Q8NFR7 591 aa11.82□□□□□ -0.52
COMMD9-201ENST00000263401 MASTLQ96GX5 879 aa11.82□□□□□ -0.52
COMMD9-201ENST00000263401 SPZ1Q9BXG8 430 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms