RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PCDHA8Q9Y5H6 950 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 CCDC194A0A1B0GVG4 234 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 PDHBP11177 359 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 SH3BP5LQ7L8J4 393 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 KLHL34Q8N239 644 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 FAM198AQ9UFP1 575 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 ATP1A3P13637 1013 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 MDM2Q00987 491 aaPredicted RBP15.46■□□□□ 0.07
VMP1-201ENST00000262291 NOLC1Q14978 699 aaKnown RBP eCLIP15.46■□□□□ 0.07
VMP1-201ENST00000262291 POSTNQ15063 836 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 KCTD1Q719H9 257 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 FILIP1Q7Z7B0 1213 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 PDCL2Q8N4E4 241 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 PLIN2Q99541 437 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 TMEM260Q9NX78 707 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 BARHL2Q9NY43 387 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 ACTN4O43707 911 aaKnown RBP15.46■□□□□ 0.07
VMP1-201ENST00000262291 GDF11O95390 407 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 ZNF771Q7L3S4 317 aaPredicted RBP15.46■□□□□ 0.07
VMP1-201ENST00000262291 ZDHHC15Q96MV8 337 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 TUBE1Q9UJT0 475 aa15.46■□□□□ 0.07
VMP1-201ENST00000262291 SCAF8Q9UPN6 1271 aaKnown RBP15.46■□□□□ 0.07
VMP1-201ENST00000262291 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
VMP1-201ENST00000262291 PP2D1A8MPX8 630 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 SMC2O95347 1197 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 CAVIN2O95810 425 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 DPEP1P16444 411 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 CALML3P27482 149 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 CCDC96Q2M329 555 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 JAKMIP3Q5VZ66 844 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 TRMT44Q8IYL2 757 aaKnown RBP15.45■□□□□ 0.06
VMP1-201ENST00000262291 TMEM60Q9H2L4 133 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 BIN2Q9UBW5 565 aaPredicted RBP15.45■□□□□ 0.06
VMP1-201ENST00000262291 MAN1B1Q9UKM7 699 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 CLRN2A0PK11 232 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 SMCO2A6NFE2 343 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 COBLO75128 1261 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 SF3B2Q13435 895 aaKnown RBP15.45■□□□□ 0.06
VMP1-201ENST00000262291 NCAPHQ15003 741 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 RRP36Q96EU6 259 aaKnown RBP15.45■□□□□ 0.06
VMP1-201ENST00000262291 PRMT6Q96LA8 375 aaPredicted RBP15.45■□□□□ 0.06
VMP1-201ENST00000262291 PPP1R1BQ9UD71 204 aaPredicted RBP15.45■□□□□ 0.06
VMP1-201ENST00000262291 ZBTB7AO95365 584 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 ATP2C1P98194 919 aaPredicted RBP15.45■□□□□ 0.06
VMP1-201ENST00000262291 IFNKQ9P0W0 207 aa15.45■□□□□ 0.06
VMP1-201ENST00000262291 SEC63Q9UGP8 760 aaKnown RBP15.45■□□□□ 0.06
VMP1-201ENST00000262291 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
VMP1-201ENST00000262291 ZNF579Q8NAF0 562 aaKnown RBP15.44■□□□□ 0.06
VMP1-201ENST00000262291 PRIMPOLQ96LW4 560 aa15.44■□□□□ 0.06
VMP1-201ENST00000262291 UIMC1Q96RL1 719 aa15.44■□□□□ 0.06
VMP1-201ENST00000262291 BLZF1Q9H2G9 400 aa15.44■□□□□ 0.06
VMP1-201ENST00000262291 FOCADQ5VW36 1801 aa15.44■□□□□ 0.06
VMP1-201ENST00000262291 SNAP25P60880 206 aa15.44■□□□□ 0.06
VMP1-201ENST00000262291 SMYD4Q8IYR2 804 aaPredicted RBP15.44■□□□□ 0.06
VMP1-201ENST00000262291 SPZ1Q9BXG8 430 aa15.44■□□□□ 0.06
VMP1-201ENST00000262291 GOLGA6L6A8MZA4 724 aa15.43■□□□□ 0.06
VMP1-201ENST00000262291 TCP10L2B9ZVM9 353 aa15.43■□□□□ 0.06
VMP1-201ENST00000262291 M0R2N6 131 aa15.43■□□□□ 0.06
VMP1-201ENST00000262291 TTLL1O95922 423 aa15.43■□□□□ 0.06
VMP1-201ENST00000262291 LETM2Q2VYF4 491 aa15.43■□□□□ 0.06
VMP1-201ENST00000262291 SMARCE1Q969G3 411 aa15.43■□□□□ 0.06
VMP1-201ENST00000262291 XPO4Q9C0E2 1151 aaKnown RBP15.43■□□□□ 0.06
VMP1-201ENST00000262291 IGKV6D-41A0A0C4DH26 115 aa15.43■□□□□ 0.06
VMP1-201ENST00000262291 TTLL6Q8N841 843 aa15.43■□□□□ 0.06
VMP1-201ENST00000262291 CACTINQ8WUQ7 758 aaKnown RBP15.43■□□□□ 0.06
VMP1-201ENST00000262291 SH3GLB2Q9NR46 395 aa15.43■□□□□ 0.06
VMP1-201ENST00000262291 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
VMP1-201ENST00000262291 MYH8P13535 1937 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 TAL1P17542 331 aaPredicted RBP15.42■□□□□ 0.06
VMP1-201ENST00000262291 BAG6P46379 1132 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 JAG1P78504 1218 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 FMR1Q06787 632 aaKnown RBP eCLIP15.42■□□□□ 0.062e-9■■□□□ 12.8
VMP1-201ENST00000262291 SEPT2Q15019 361 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 KLHL10Q6JEL2 608 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 LARGE2Q8N3Y3 721 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 C4orf32Q8N8J7 132 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 CCDC148Q8NFR7 591 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 FERMT2Q96AC1 680 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 PAGE5Q96GU1 130 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 TRIM34Q9BYJ4 488 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 HSD3B7Q9H2F3 369 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 USP17L10C9JJH3 530 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 KARSQ15046 597 aaKnown RBP15.42■□□□□ 0.06
VMP1-201ENST00000262291 SOGA3Q5TF21 947 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 DPF2Q92785 391 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 NUP88Q99567 741 aaPredicted RBP15.42■□□□□ 0.06
VMP1-201ENST00000262291 LZTS2Q9BRK4 669 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 FANCLQ9NW38 375 aa15.42■□□□□ 0.06
VMP1-201ENST00000262291 EEF2P13639 858 aaKnown RBP15.41■□□□□ 0.06
VMP1-201ENST00000262291 UBE2SQ16763 222 aa15.41■□□□□ 0.06
VMP1-201ENST00000262291 CERKLQ49MI3 558 aaPredicted RBP15.41■□□□□ 0.06
VMP1-201ENST00000262291 SARM1Q6SZW1 724 aa15.41■□□□□ 0.06
VMP1-201ENST00000262291 ADGRF4Q8IZF3 695 aa15.41■□□□□ 0.06
VMP1-201ENST00000262291 SWAP70Q9UH65 585 aa15.41■□□□□ 0.06
VMP1-201ENST00000262291 PSMD14O00487 310 aa15.41■□□□□ 0.06
VMP1-201ENST00000262291 CCNT1O60563 726 aaKnown RBP15.41■□□□□ 0.06
VMP1-201ENST00000262291 PPP1R11O60927 126 aaPredicted RBP15.41■□□□□ 0.06
VMP1-201ENST00000262291 KCNA3P22001 575 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms