RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 LGR4Q9BXB1 951 aa3.19□□□□□ -1.9
ATF1-201ENST00000262053 PAK6Q9NQU5 681 aaPredicted RBP3.19□□□□□ -1.9
ATF1-201ENST00000262053 TMEM260Q9NX78 707 aa3.19□□□□□ -1.9
ATF1-201ENST00000262053 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.19□□□□□ -1.92e-7■■■■■ 63.3
ATF1-201ENST00000262053 CEP131Q9UPN4 1083 aa3.19□□□□□ -1.9
ATF1-201ENST00000262053 A0A1W2PQH9 124 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 H3BS24 57 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 MEIS1O00470 390 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 TNFRSF10CO14798 259 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 RGS13O14921 159 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 PPM1GO15355 546 aaPredicted RBP3.18□□□□□ -1.9
ATF1-201ENST00000262053 CEACAM5P06731 702 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 CDK11BP21127 795 aaKnown RBP3.18□□□□□ -1.9
ATF1-201ENST00000262053 NFXL1Q6ZNB6 911 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 ARHGAP27Q6ZUM4 889 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 LRRC56Q8IYG6 542 aaPredicted RBP3.18□□□□□ -1.9
ATF1-201ENST00000262053 MISP3Q96FF7 219 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 HSPA12BQ96MM6 686 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 PRDM7Q9NQW5 492 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 PRKAB1Q9Y478 270 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 CYP27A1Q02318 531 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 IFRD2Q12894 506 aaPredicted RBP3.18□□□□□ -1.9
ATF1-201ENST00000262053 MLECQ14165 292 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 AXDND1Q5T1B0 1012 aaPredicted RBP3.18□□□□□ -1.9
ATF1-201ENST00000262053 SFRP5Q5T4F7 317 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 LARP1BQ659C4 914 aaKnown RBP3.18□□□□□ -1.9
ATF1-201ENST00000262053 TMC3Q7Z5M5 1100 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 SPRED2Q7Z698 418 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 KIAA0907Q7Z7F0 614 aaPredicted RBP3.18□□□□□ -1.9
ATF1-201ENST00000262053 AMIGO3Q86WK7 504 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 WFDC3Q8IUB2 231 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 LILRB2Q8N423 598 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 MFSD4AQ8N468 514 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 SH3TC2Q8TF17 1288 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 VWCEQ96DN2 955 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 DNAJC7Q99615 494 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 MKRN2Q9H000 416 aaKnown RBP3.18□□□□□ -1.9
ATF1-201ENST00000262053 ST7Q9NRC1 585 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 SLC5A6Q9Y289 635 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 CAPN6Q9Y6Q1 641 aa3.18□□□□□ -1.9
ATF1-201ENST00000262053 CARMIL2Q6F5E8 1435 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 CCDC85CA6NKD9 419 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 SHOXO15266 292 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 CLEC3AO75596 197 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 GJB6O95452 261 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 ZSCAN22P10073 491 aaPredicted RBP3.17□□□□□ -1.9
ATF1-201ENST00000262053 CFPP27918 469 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 CCNFP41002 786 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 CTSWP56202 376 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 PLCL1Q15111 1095 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 LONRF2Q1L5Z9 754 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 C2orf27AQ580R0 203 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 NBPF12Q5TAG4 269 aaPredicted RBP3.17□□□□□ -1.9
ATF1-201ENST00000262053 C6orf15Q6UXA7 325 aaPredicted RBP3.17□□□□□ -1.9
ATF1-201ENST00000262053 SYNPOQ8N3V7 929 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 DTWD2Q8NBA8 298 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 THAP3Q8WTV1 239 aaPredicted RBP3.17□□□□□ -1.9
ATF1-201ENST00000262053 EPN3Q9H201 632 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 PHAXQ9H814 394 aaKnown RBP3.17□□□□□ -1.9
ATF1-201ENST00000262053 ATP13A1Q9HD20 1204 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 ZSWIM5Q9P217 1185 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 GTF2IRD1Q9UHL9 959 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 GNAT3A8MTJ3 354 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 FAM155AB1AL88 458 aaPredicted RBP3.17□□□□□ -1.9
ATF1-201ENST00000262053 CDC45O75419 566 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 NCAPHQ15003 741 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 AOC3Q16853 763 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 RNF187Q5TA31 235 aaPredicted RBP3.17□□□□□ -1.9
ATF1-201ENST00000262053 HOMER1Q86YM7 354 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 FAM178BQ8IXR5 827 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 ADCY4Q8NFM4 1077 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 KLHL6Q8WZ60 621 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 APPBP2Q92624 585 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 UBE2FQ969M7 185 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 GPATCH3Q96I76 525 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 ST14Q9Y5Y6 855 aa3.17□□□□□ -1.9
ATF1-201ENST00000262053 CBFA2T2O43439 604 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 ETV3P41162 512 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 MESP2Q0VG99 397 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 PTPROQ16827 1216 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 ZC3H12BQ5HYM0 836 aaKnown RBP3.16□□□□□ -1.9
ATF1-201ENST00000262053 MRM1Q6IN84 353 aaKnown RBP3.16□□□□□ -1.9
ATF1-201ENST00000262053 EEPD1Q7L9B9 569 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 CILP2Q8IUL8 1156 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 ZCRB1Q8TBF4 217 aaKnown RBP3.16□□□□□ -1.9
ATF1-201ENST00000262053 NETO1Q8TDF5 533 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 RNF141Q8WVD5 230 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 BRF1Q92994 677 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 FEZ1Q99689 392 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 LMCD1Q9NZU5 365 aa3.16□□□□□ -1.9
ATF1-201ENST00000262053 EPHX1P07099 455 aa3.15□□□□□ -1.9
ATF1-201ENST00000262053 CD8BP10966 210 aa3.15□□□□□ -1.9
ATF1-201ENST00000262053 CHMP4BP1P59074 171 aa3.15□□□□□ -1.9
ATF1-201ENST00000262053 SQSTM1Q13501 440 aa3.15□□□□□ -1.9
ATF1-201ENST00000262053 ZNF792Q3KQV3 632 aa3.15□□□□□ -1.9
ATF1-201ENST00000262053 GNPTABQ3T906 1256 aa3.15□□□□□ -1.9
ATF1-201ENST00000262053 MTERF2Q49AM1 385 aa3.15□□□□□ -1.9
ATF1-201ENST00000262053 KIAA1211LQ6NV74 962 aa3.15□□□□□ -1.9
ATF1-201ENST00000262053 C16orf86Q6ZW13 317 aa3.15□□□□□ -1.9
ATF1-201ENST00000262053 C1QL4Q86Z23 238 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms