RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ATP5JP18859 108 aa15.83■□□□□ 0.12
SGCA-201ENST00000262018 SHCBP1Q8NEM2 672 aa15.83■□□□□ 0.12
SGCA-201ENST00000262018 USP26Q9BXU7 913 aa15.83■□□□□ 0.12
SGCA-201ENST00000262018 SMCHD1A6NHR9 2005 aa15.82■□□□□ 0.12
SGCA-201ENST00000262018 ARID4AP29374 1257 aaPredicted RBP15.82■□□□□ 0.12
SGCA-201ENST00000262018 PLS1Q14651 629 aa15.82■□□□□ 0.12
SGCA-201ENST00000262018 TTC39AQ5SRH9 613 aa15.82■□□□□ 0.12
SGCA-201ENST00000262018 NAA16Q6N069 864 aaPredicted RBP15.82■□□□□ 0.12
SGCA-201ENST00000262018 PSRC1Q6PGN9 363 aaPredicted RBP15.82■□□□□ 0.12
SGCA-201ENST00000262018 NCAPG2Q86XI2 1143 aa15.82■□□□□ 0.12
SGCA-201ENST00000262018 TMEM199Q8N511 208 aa15.82■□□□□ 0.12
SGCA-201ENST00000262018 EVI5LQ96CN4 794 aa15.82■□□□□ 0.12
SGCA-201ENST00000262018 ZNF512BQ96KM6 892 aaPredicted RBP15.82■□□□□ 0.12
SGCA-201ENST00000262018 SNX27Q96L92 541 aa15.82■□□□□ 0.12
SGCA-201ENST00000262018 ANP32EQ9BTT0 268 aa15.82■□□□□ 0.12
SGCA-201ENST00000262018 YBX2Q9Y2T7 364 aaKnown RBP15.82■□□□□ 0.12
SGCA-201ENST00000262018 GPR37L1O60883 481 aa15.81■□□□□ 0.12
SGCA-201ENST00000262018 ACLYP53396 1101 aa15.81■□□□□ 0.12
SGCA-201ENST00000262018 PPP4CP60510 307 aa15.81■□□□□ 0.12
SGCA-201ENST00000262018 COG2Q14746 738 aa15.81■□□□□ 0.12
SGCA-201ENST00000262018 NUP133Q8WUM0 1156 aa15.81■□□□□ 0.12
SGCA-201ENST00000262018 HERVK_113Q902F9 699 aa15.81■□□□□ 0.12
SGCA-201ENST00000262018 LENG1Q96BZ8 264 aaPredicted RBP15.81■□□□□ 0.12
SGCA-201ENST00000262018 HOXC10Q9NYD6 342 aa15.81■□□□□ 0.12
SGCA-201ENST00000262018 NRBP1Q9UHY1 535 aa15.81■□□□□ 0.12
SGCA-201ENST00000262018 TAL1P17542 331 aaPredicted RBP15.8■□□□□ 0.12
SGCA-201ENST00000262018 ABRAQ8N0Z2 381 aa15.8■□□□□ 0.12
SGCA-201ENST00000262018 TSEN34Q9BSV6 310 aaKnown RBP15.8■□□□□ 0.12
SGCA-201ENST00000262018 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
SGCA-201ENST00000262018 TANGO6Q9C0B7 1094 aa15.8■□□□□ 0.12
SGCA-201ENST00000262018 MROH8Q9H579 483 aa15.8■□□□□ 0.12
SGCA-201ENST00000262018 C11orf16Q9NQ32 467 aa15.8■□□□□ 0.12
SGCA-201ENST00000262018 EPB41L2O43491 1005 aaKnown RBP15.79■□□□□ 0.12
SGCA-201ENST00000262018 ADAMTS4O75173 837 aa15.79■□□□□ 0.12
SGCA-201ENST00000262018 FCER1AP12319 257 aa15.79■□□□□ 0.12
SGCA-201ENST00000262018 ABCB5Q2M3G0 1257 aa15.79■□□□□ 0.12
SGCA-201ENST00000262018 TATDN1Q6P1N9 297 aa15.79■□□□□ 0.12
SGCA-201ENST00000262018 KHSRPQ92945 711 aaKnown RBP eCLIP15.79■□□□□ 0.12
SGCA-201ENST00000262018 MTIF3Q9H2K0 278 aaKnown RBP15.79■□□□□ 0.12
SGCA-201ENST00000262018 BOLA2Q9H3K6 86 aa15.79■□□□□ 0.12
SGCA-201ENST00000262018 CABP5Q9NP86 173 aa15.79■□□□□ 0.12
SGCA-201ENST00000262018 AKR1A1P14550 325 aa15.78■□□□□ 0.12
SGCA-201ENST00000262018 MCAMP43121 646 aa15.78■□□□□ 0.12
SGCA-201ENST00000262018 BECN1Q14457 450 aa15.78■□□□□ 0.12
SGCA-201ENST00000262018 CERKLQ49MI3 558 aaPredicted RBP15.78■□□□□ 0.12
SGCA-201ENST00000262018 PPP2R2DQ66LE6 453 aa15.78■□□□□ 0.12
SGCA-201ENST00000262018 ADGRA1Q86SQ6 560 aa15.78■□□□□ 0.12
SGCA-201ENST00000262018 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.78■□□□□ 0.12
SGCA-201ENST00000262018 KIF2CQ99661 725 aa15.78■□□□□ 0.12
SGCA-201ENST00000262018 MOXD2PA6NHM9 499 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 HIP1O00291 1037 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 FGBP02675 491 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 MRE11P49959 708 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 RABGGTBP53611 331 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 KCNA10Q16322 511 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 VTI1AQ96AJ9 217 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 HAUS7Q99871 368 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 TINF2Q9BSI4 451 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 IL23AQ9NPF7 189 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 SNRKQ9NRH2 765 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 MROH7Q68CQ1 1323 aa15.77■□□□□ 0.12
SGCA-201ENST00000262018 SGSM2O43147 1006 aa15.77■□□□□ 0.11
SGCA-201ENST00000262018 TLL1O43897 1013 aa15.77■□□□□ 0.11
SGCA-201ENST00000262018 PGK2P07205 417 aa15.77■□□□□ 0.11
SGCA-201ENST00000262018 ZNF865P0CJ78 1059 aaPredicted RBP15.77■□□□□ 0.11
SGCA-201ENST00000262018 CYP2C18P33260 490 aa15.77■□□□□ 0.11
SGCA-201ENST00000262018 DYNLL1P63167 89 aaKnown RBP15.77■□□□□ 0.11
SGCA-201ENST00000262018 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.11
SGCA-201ENST00000262018 MB21D1Q8N884 522 aa15.77■□□□□ 0.11
SGCA-201ENST00000262018 RUFY2Q8WXA3 655 aa15.77■□□□□ 0.11
SGCA-201ENST00000262018 GLT1D1Q96MS3 346 aa15.77■□□□□ 0.11
SGCA-201ENST00000262018 SERPINB13Q9UIV8 391 aa15.77■□□□□ 0.11
SGCA-201ENST00000262018 SYNRGQ9UMZ2 1314 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 CDK5RAP2Q96SN8 1893 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 SMIM22K7EJ46 135 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 MYOGP15173 224 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 CDK7P50613 346 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 OTOP2Q7RTS6 562 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 KLHDC9Q8NEP7 349 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 MMP19Q99542 508 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 DIAPH3Q9NSV4 1193 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
SGCA-201ENST00000262018 COG5Q9UP83 839 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 ROBO3Q96MS0 1386 aa15.76■□□□□ 0.11
SGCA-201ENST00000262018 RFXAPO00287 272 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 GTPBP6O43824 516 aaPredicted RBP15.75■□□□□ 0.11
SGCA-201ENST00000262018 DSG3P32926 999 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 GUCY1A2P33402 732 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 USP5P45974 858 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 SEPT2Q15019 361 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 TICAM2Q86XR7 235 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 ATG4CQ96DT6 458 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 IL25Q9H293 177 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 CNPY2Q9Y2B0 182 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 MTCH2Q9Y6C9 303 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 ELP1O95163 1332 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 FOCADQ5VW36 1801 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 GBF1Q92538 1859 aa15.75■□□□□ 0.11
SGCA-201ENST00000262018 PRRC2BQ5JSZ5 2229 aaKnown RBP15.75■□□□□ 0.11
SGCA-201ENST00000262018 CHD7Q9P2D1 2997 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms