RNA–Protein interactions for RNA: ENST00000261944.9

CDHR2-201, Transcript of cadherin related family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR2, Length 4,068 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-201ENST00000261944 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
CDHR2-201ENST00000261944 PDIA3P30101 505 aaKnown RBP11.65□□□□□ -0.54
CDHR2-201ENST00000261944 ZNF280AP59817 542 aaPredicted RBP11.65□□□□□ -0.54
CDHR2-201ENST00000261944 TRAF1Q13077 416 aa11.65□□□□□ -0.54
CDHR2-201ENST00000261944 GPATCH4Q5T3I0 446 aaKnown RBP11.65□□□□□ -0.54
CDHR2-201ENST00000261944 PPFIBP1Q86W92 1011 aa11.65□□□□□ -0.54
CDHR2-201ENST00000261944 DGKHQ86XP1 1220 aa11.65□□□□□ -0.54
CDHR2-201ENST00000261944 GMLQ99445 158 aa11.65□□□□□ -0.54
CDHR2-201ENST00000261944 RPAP1Q9BWH6 1393 aaPredicted RBP11.65□□□□□ -0.54
CDHR2-201ENST00000261944 SYT1P21579 422 aa11.65□□□□□ -0.55
CDHR2-201ENST00000261944 CCNA1P78396 465 aa11.65□□□□□ -0.55
CDHR2-201ENST00000261944 FASTKD5Q7L8L6 764 aaKnown RBP11.65□□□□□ -0.55
CDHR2-201ENST00000261944 SH2B2O14492 632 aaPredicted RBP11.64□□□□□ -0.55
CDHR2-201ENST00000261944 SHMT1P34896 483 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 LETM2Q2VYF4 491 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 SYDE2Q5VT97 1194 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 CCDC70Q6NSX1 233 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 RASGRP2Q7LDG7 609 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 STAG2Q8N3U4 1231 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 BBXQ8WY36 941 aaPredicted RBP11.64□□□□□ -0.55
CDHR2-201ENST00000261944 SNRNP48Q6IEG0 339 aaKnown RBP11.64□□□□□ -0.55
CDHR2-201ENST00000261944 LRSAM1Q6UWE0 723 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 ANKRD13CQ8N6S4 541 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 PGBD1Q96JS3 809 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 TM6SF1Q9BZW5 370 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 TTC12Q9H892 705 aaPredicted RBP11.64□□□□□ -0.55
CDHR2-201ENST00000261944 ANO10Q9NW15 660 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 F13A1P00488 732 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 GPS2Q13227 327 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 ARGLU1Q9NWB6 273 aaPredicted RBP11.64□□□□□ -0.55
CDHR2-201ENST00000261944 MAGEC2Q9UBF1 373 aaPredicted RBP11.64□□□□□ -0.55
CDHR2-201ENST00000261944 CPA4Q9UI42 421 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 TAF1P21675 1872 aa11.64□□□□□ -0.55
CDHR2-201ENST00000261944 C4AP0C0L4 1744 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 BAZ2BQ9UIF8 2168 aaKnown RBP11.63□□□□□ -0.55
CDHR2-201ENST00000261944 SMCO2A6NFE2 343 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 DDX39AO00148 427 aaKnown RBP11.63□□□□□ -0.55
CDHR2-201ENST00000261944 CYP2C8P10632 490 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 MARCKSP29966 332 aaPredicted RBP11.63□□□□□ -0.55
CDHR2-201ENST00000261944 GNA11P29992 359 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 HOXA13P31271 388 aaPredicted RBP11.63□□□□□ -0.55
CDHR2-201ENST00000261944 SKIDA1Q1XH10 827 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 RBM46Q8TBY0 533 aaKnown RBP11.63□□□□□ -0.55
CDHR2-201ENST00000261944 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 CPLX3Q8WVH0 158 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 MRIQ9BWK5 157 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 EHMT1Q9H9B1 1298 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 HOXC10Q9NYD6 342 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 CETPP11597 493 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 SFPQP23246 707 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDHR2-201ENST00000261944 RGMBQ6NW40 437 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 RASGRP4Q8TDF6 673 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 AIFM3Q96NN9 605 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 MPHOSPH6Q99547 160 aaKnown RBP11.63□□□□□ -0.55
CDHR2-201ENST00000261944 SLF1Q9BQI6 1058 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 PPP2R3BQ9Y5P8 575 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 SLX4Q8IY92 1834 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
CDHR2-201ENST00000261944 ORC4O43929 436 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 CDC37Q16543 378 aaPredicted RBP11.63□□□□□ -0.55
CDHR2-201ENST00000261944 TMEM132AQ24JP5 1023 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 PIK3AP1Q6ZUJ8 805 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 TTC14Q96N46 770 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 AMNQ9BXJ7 453 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 TMX1Q9H3N1 280 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 PSTPIP2Q9H939 334 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 GJB4Q9NTQ9 266 aa11.63□□□□□ -0.55
CDHR2-201ENST00000261944 DEXIO95424 95 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 PKP1Q13835 747 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 ASPRV1Q53RT3 343 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 FKBP1CQ5VVH2 108 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 MB21D2Q8IYB1 491 aaPredicted RBP11.62□□□□□ -0.55
CDHR2-201ENST00000261944 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 ATG4CQ96DT6 458 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 VCPKMTQ9H867 229 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 DDX19AQ9NUU7 478 aaKnown RBP11.62□□□□□ -0.55
CDHR2-201ENST00000261944 RTEL1Q9NZ71 1219 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 USP17L15C9J2P7 530 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 USP17L13C9JLJ4 530 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 USP17L11C9JVI0 530 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 USP17L18D6R9N7 530 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 USP17L22D6RA61 530 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 USP17L17D6RBQ6 530 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 USP17L19D6RCP7 530 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 USP17L20D6RJB6 530 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 TNPO2O14787 897 aaKnown RBP11.62□□□□□ -0.55
CDHR2-201ENST00000261944 USP17L24Q0WX57 530 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 COG2Q14746 738 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 SH3BP5LQ7L8J4 393 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 PRPF38AQ8NAV1 312 aaKnown RBP11.62□□□□□ -0.55
CDHR2-201ENST00000261944 SBF2Q86WG5 1849 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 CHMP2AO43633 222 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 MCM7P33993 719 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 MMP14P50281 582 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 BACE1P56817 501 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 SCRN1Q12765 414 aa11.62□□□□□ -0.55
CDHR2-201ENST00000261944 LAMB4A4D0S4 1761 aa11.61□□□□□ -0.55
CDHR2-201ENST00000261944 POTEB2H3BUK9 544 aa11.61□□□□□ -0.55
CDHR2-201ENST00000261944 CD2BP2O95400 341 aaKnown RBP11.61□□□□□ -0.55
CDHR2-201ENST00000261944 LARGE1O95461 756 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms