RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 INF2Q27J81 1249 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 KIF4BQ2VIQ3 1234 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 NAALADL2Q58DX5 795 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 NLRP3Q96P20 1036 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 KRT9P35527 623 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 TXLNAP40222 546 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 DIXDC1Q155Q3 683 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 GRIK5Q16478 980 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 NBPF5PQ86XG9 351 aaPredicted RBP18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 IRF2BP1Q8IU81 584 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 ARFGAP3Q9NP61 516 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 TRIM10Q9UDY6 481 aa18.46■□□□□ 0.55
TM9SF1-201ENST00000261789 CYTH3O43739 400 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 GOLGA8HP0CJ92 632 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 KIF5BP33176 963 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 SRGAP1Q7Z6B7 1085 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 SH3RF3Q8TEJ3 882 aaPredicted RBP18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 LRRC15Q8TF66 581 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 PCDHA4Q9UN74 947 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 TFR2Q9UP52 801 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 THRAP3Q9Y2W1 955 aaKnown RBP18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 ITIH6Q6UXX5 1313 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 USP5P45974 858 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 HEATR3Q7Z4Q2 680 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 DISC1Q9NRI5 854 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 CDC23Q9UJX2 597 aa18.45■□□□□ 0.54
TM9SF1-201ENST00000261789 GOLGB1Q14789 3259 aaKnown RBP18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 LONP1P36776 959 aaKnown RBP18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 SBK1Q52WX2 424 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 WWC2Q6AWC2 1192 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 GPR101Q96P66 508 aaPredicted RBP18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 ANKZF1Q9H8Y5 726 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 CCDC194A0A1B0GVG4 234 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 PARP1P09874 1014 aaKnown RBP18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 GYS2P54840 703 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 SLC10A5Q5PT55 438 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 DTHD1Q6ZMT9 781 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 AMIGO3Q86WK7 504 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 SMARCC1Q92922 1105 aaPredicted RBP18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 FUT8Q9BYC5 575 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 MKNK2Q9HBH9 465 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 PCDHA6Q9UN73 950 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 STX8Q9UNK0 236 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 PCDHA8Q9Y5H6 950 aa18.44■□□□□ 0.54
TM9SF1-201ENST00000261789 CTAGE9A4FU28 777 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 CALML3P27482 149 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 OAS2P29728 719 aaKnown RBP18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 ARHGAP25P42331 645 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 SMC1AQ14683 1233 aaKnown RBP18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 C12orf60Q5U649 245 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 ARL6IP4Q66PJ3 421 aaKnown RBP18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 TMTC1Q8IUR5 882 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 PNKPQ96T60 521 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 SAP30BPQ9UHR5 308 aaKnown RBP18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 SPATA31A5Q5VU36 1347 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 SPATA31A7Q8IWB4 1347 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 TTC26A0AVF1 554 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 UBAP1LF5GYI3 381 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 FAM98CQ17RN3 349 aaKnown RBP18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 LONRF2Q1L5Z9 754 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 TGFBRAP1Q8WUH2 860 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
TM9SF1-201ENST00000261789 M0R2N6 131 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 RHOXF2BP0C7M4 288 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 FECHP22830 423 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 ST5P78524 1137 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 CYP26C1Q6V0L0 522 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 ADSSL1Q8N142 457 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 CCDC51Q96ER9 411 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 RHOXF2Q9BQY4 288 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 SUGCTQ9HAC7 445 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 RMND1Q9NWS8 449 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 MKRN1Q9UHC7 482 aaKnown RBP18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 TTF2Q9UNY4 1162 aaKnown RBP18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 LAMB1P07942 1786 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 TSPY3P0CV98 308 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 TSPY8P0CW00 308 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 ANKRD20A12PQ8NF67 263 aa18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 REXO2Q9Y3B8 237 aaKnown RBP18.42■□□□□ 0.54
TM9SF1-201ENST00000261789 UBA7P41226 1012 aa18.41■□□□□ 0.54
TM9SF1-201ENST00000261789 SPAG1Q07617 926 aa18.41■□□□□ 0.54
TM9SF1-201ENST00000261789 UBXN6Q9BZV1 441 aa18.41■□□□□ 0.54
TM9SF1-201ENST00000261789 ANKIB1Q9P2G1 1089 aa18.41■□□□□ 0.54
TM9SF1-201ENST00000261789 GUCA1BQ9UMX6 200 aa18.41■□□□□ 0.54
TM9SF1-201ENST00000261789 KLRC4O43908 158 aa18.41■□□□□ 0.54
TM9SF1-201ENST00000261789 TM4SF1P30408 202 aa18.41■□□□□ 0.54
TM9SF1-201ENST00000261789 DGKHQ86XP1 1220 aa18.41■□□□□ 0.54
TM9SF1-201ENST00000261789 ANKRD2Q9GZV1 360 aa18.41■□□□□ 0.54
TM9SF1-201ENST00000261789 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
TM9SF1-201ENST00000261789 CYP2C19P33261 490 aa18.4■□□□□ 0.54
TM9SF1-201ENST00000261789 NCAPH2Q6IBW4 605 aa18.4■□□□□ 0.54
TM9SF1-201ENST00000261789 MAPKAPK5Q8IW41 473 aa18.4■□□□□ 0.54
TM9SF1-201ENST00000261789 PYM1Q9BRP8 204 aaKnown RBP18.4■□□□□ 0.54
TM9SF1-201ENST00000261789 H7C1D1 291 aa18.4■□□□□ 0.54
TM9SF1-201ENST00000261789 ENC1O14682 589 aa18.4■□□□□ 0.54
TM9SF1-201ENST00000261789 NKRFO15226 690 aaKnown RBP eCLIP18.4■□□□□ 0.54
TM9SF1-201ENST00000261789 GNPATO15228 680 aa18.4■□□□□ 0.54
TM9SF1-201ENST00000261789 LDHBP07195 334 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms