RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 IWS1Q96ST2 819 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 KRT10P13645 584 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 PPP2R5CQ13362 524 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 PKP1Q13835 747 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 ALS2CLQ60I27 953 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 C16orf87Q6PH81 154 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 DPP8Q6V1X1 898 aaPredicted RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 ZC3H18Q86VM9 953 aaKnown RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 GABPB2Q8TAK5 448 aaPredicted RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 ADAM21Q9UKJ8 722 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 CCNT1O60563 726 aaKnown RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 JAK2O60674 1132 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 LMNAP02545 664 aaKnown RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 ZFXP17010 805 aaPredicted RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 RPS6KA2Q15349 733 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 GNPTABQ3T906 1256 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 NAP1L4Q99733 375 aaKnown RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 SATB2Q9UPW6 733 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 ARHGAP4P98171 946 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 ACTN3Q08043 901 aaPredicted RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 CAPRIN2Q6IMN6 1127 aaKnown RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 EPB41L5Q9HCM4 733 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 PALMDQ9NP74 551 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 RIC8AQ9NPQ8 531 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 FANCLQ9NW38 375 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 GRIN2BQ13224 1484 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 MRC2Q9UBG0 1479 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 TTC4O95801 387 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 BIRC3Q13489 604 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 CAPN12Q6ZSI9 719 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 ANKRD13DQ6ZTN6 518 aa11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 DIS3L2Q8IYB7 885 aaKnown RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 CACTINQ8WUQ7 758 aaKnown RBP11.78□□□□□ -0.52
SLC6A4-201ENST00000261707 ZBTB22O15209 634 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 PDHA1P08559 390 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 CXorf56Q9H5V9 222 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 EPN1Q9Y6I3 576 aaPredicted RBP11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 TFCP2Q12800 502 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 PTPROQ16827 1216 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 NBPF9Q3BBW0 867 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 DYDC2Q96IM9 177 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 NCAPGQ9BPX3 1015 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 IFT122Q9HBG6 1241 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 INTUQ9ULD6 942 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 PTPN23Q9H3S7 1636 aa11.77□□□□□ -0.52
SLC6A4-201ENST00000261707 AOX1Q06278 1338 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 PPIP5K2O43314 1243 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 TADA3O75528 432 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 UFL1O94874 794 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 IL2RBP14784 551 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 FNBP1Q96RU3 617 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 AFG3L2Q9Y4W6 797 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 SLC4A7Q9Y6M7 1214 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 hCG_2014768A0A024R1R8 64 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 HNRNPCP07910 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 BCRP11274 1271 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 RWDD2BP57060 319 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 MMEL1Q495T6 779 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 ABI1Q8IZP0 508 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 QTRT2Q9H974 415 aaKnown RBP11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 EPS15L1Q9UBC2 864 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 SGSM2O43147 1006 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 NUDCD3Q8IVD9 361 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 PARP9Q8IXQ6 854 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 TEKT1Q969V4 418 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 AZI2Q9H6S1 392 aa11.77□□□□□ -0.53
SLC6A4-201ENST00000261707 MAN1A2O60476 641 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 VAMP4O75379 141 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 ATF2P15336 505 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 RBM6P78332 1123 aaKnown RBP11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 GOLGA8FQ08AF8 430 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 GOLGA8DPQ0D2H9 430 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 KRT80Q6KB66 452 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 ADAT2Q7Z6V5 191 aaKnown RBP11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 TRIML2Q8N7C3 387 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 NSMCE1Q8WV22 266 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 RSAD2Q8WXG1 361 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 FNDC3AQ9Y2H6 1198 aaKnown RBP11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 NUB1Q9Y5A7 615 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 HEXIM1O94992 359 aaKnown RBP11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 HOMEZQ8IX15 550 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 MAGEB6Q8N7X4 407 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 TMEM87BQ96K49 555 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 SPZ1Q9BXG8 430 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 IBTKQ9P2D0 1353 aaPredicted RBP11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 LMNB2Q03252 620 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 CWF19L2Q2TBE0 894 aaKnown RBP11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 ARHGEF18Q6ZSZ5 1173 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 FGD4Q96M96 766 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 FAM167BQ9BTA0 163 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 MYCLP12524 364 aaPredicted RBP11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 ME3Q16798 604 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 HELBQ8NG08 1087 aaPredicted RBP11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 GANCQ8TET4 914 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 PASKQ96RG2 1323 aa11.76□□□□□ -0.53
SLC6A4-201ENST00000261707 MSH2P43246 934 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms