RNA–Protein interactions for RNA: ENST00000261448.5

CASQ2-201, Transcript of calsequestrin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASQ2, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-201ENST00000261448 TPM3P06753 285 aa13.49□□□□□ -0.25
CASQ2-201ENST00000261448 NAPAP54920 295 aa13.49□□□□□ -0.25
CASQ2-201ENST00000261448 INF2Q27J81 1249 aa13.49□□□□□ -0.25
CASQ2-201ENST00000261448 SHROOM1Q2M3G4 852 aaPredicted RBP13.49□□□□□ -0.25
CASQ2-201ENST00000261448 C17orf53Q8N3J3 647 aaPredicted RBP13.49□□□□□ -0.25
CASQ2-201ENST00000261448 SIPA1L1O43166 1804 aa13.49□□□□□ -0.25
CASQ2-201ENST00000261448 SMCO2A6NFE2 343 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 SLFN14P0C7P3 912 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 ARL6IP4Q66PJ3 421 aaKnown RBP13.48□□□□□ -0.25
CASQ2-201ENST00000261448 KANK3Q6NY19 840 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 SH3RF1Q7Z6J0 888 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 SUPT20HQ8NEM7 779 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 DHX36Q9H2U1 1008 aaKnown RBP13.48□□□□□ -0.25
CASQ2-201ENST00000261448 PYCARDQ9ULZ3 195 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 MYH8P13535 1937 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 GREB1LQ9C091 1923 aaPredicted RBP13.48□□□□□ -0.25
CASQ2-201ENST00000261448 MPHOSPH10O00566 681 aaKnown RBP13.48□□□□□ -0.25
CASQ2-201ENST00000261448 PAGE5Q96GU1 130 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 TMEM60Q9H2L4 133 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 TDRD3Q9H7E2 651 aaKnown RBP13.48□□□□□ -0.25
CASQ2-201ENST00000261448 PI4KBQ9UBF8 816 aa13.48□□□□□ -0.25
CASQ2-201ENST00000261448 SEC63Q9UGP8 760 aaKnown RBP13.48□□□□□ -0.25
CASQ2-201ENST00000261448 SMTNL1A8MU46 457 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
CASQ2-201ENST00000261448 ZNF543Q08ER8 600 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 MORC3Q14149 939 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 E2F4Q16254 413 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 TTLL6Q8N841 843 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 SMARCE1Q969G3 411 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 PRMT6Q96LA8 375 aaPredicted RBP13.47□□□□□ -0.25
CASQ2-201ENST00000261448 CCDC17Q96LX7 622 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 LRMPQ12912 555 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 CFAP100Q494V2 611 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 KIAA1524Q8TCG1 905 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 CCDC12Q8WUD4 166 aaPredicted RBP13.47□□□□□ -0.25
CASQ2-201ENST00000261448 ATP1A3P13637 1013 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 DPEP1P16444 411 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 CASP1P29466 404 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
CASQ2-201ENST00000261448 CDC25AP30304 524 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 AFMP43652 599 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 BAG6P46379 1132 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 TATDN1Q6P1N9 297 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 ZSCAN29Q8IWY8 852 aaPredicted RBP13.47□□□□□ -0.25
CASQ2-201ENST00000261448 C6orf50Q9HD87 102 aa13.47□□□□□ -0.25
CASQ2-201ENST00000261448 MYL5Q02045 173 aa13.46□□□□□ -0.25
CASQ2-201ENST00000261448 NOLC1Q14978 699 aaKnown RBP eCLIP13.46□□□□□ -0.25
CASQ2-201ENST00000261448 SIAH1Q8IUQ4 282 aa13.46□□□□□ -0.25
CASQ2-201ENST00000261448 CACTINQ8WUQ7 758 aaKnown RBP13.46□□□□□ -0.25
CASQ2-201ENST00000261448 COA7Q96BR5 231 aa13.46□□□□□ -0.25
CASQ2-201ENST00000261448 JMJD4Q9H9V9 463 aa13.46□□□□□ -0.25
CASQ2-201ENST00000261448 GNA11P29992 359 aa13.46□□□□□ -0.26
CASQ2-201ENST00000261448 ATP2B2Q01814 1243 aa13.46□□□□□ -0.26
CASQ2-201ENST00000261448 CERKLQ49MI3 558 aaPredicted RBP13.46□□□□□ -0.26
CASQ2-201ENST00000261448 ADGRF4Q8IZF3 695 aa13.46□□□□□ -0.26
CASQ2-201ENST00000261448 XPO4Q9C0E2 1151 aaKnown RBP13.46□□□□□ -0.26
CASQ2-201ENST00000261448 IFNKQ9P0W0 207 aa13.46□□□□□ -0.26
CASQ2-201ENST00000261448 COL4A5P29400 1685 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 ESYT2A0FGR8 921 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 PPP1R11O60927 126 aaPredicted RBP13.45□□□□□ -0.26
CASQ2-201ENST00000261448 LONP1P36776 959 aaKnown RBP13.45□□□□□ -0.26
CASQ2-201ENST00000261448 DPYDQ12882 1025 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 SF3B2Q13435 895 aaKnown RBP13.45□□□□□ -0.26
CASQ2-201ENST00000261448 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 CCDC93Q567U6 631 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 KCTD1Q719H9 257 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 KRT25Q7Z3Z0 450 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 TRIML1Q8N9V2 468 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 MED15Q96RN5 788 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 PSMD1Q99460 953 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 MTRQ99707 1265 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 BIN2Q9UBW5 565 aaPredicted RBP13.45□□□□□ -0.26
CASQ2-201ENST00000261448 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
CASQ2-201ENST00000261448 SLC16A2P36021 539 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 FMR1Q06787 632 aaKnown RBP eCLIP13.45□□□□□ -0.26
CASQ2-201ENST00000261448 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 MLKLQ8NB16 471 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 STAMQ92783 540 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 MKL1Q969V6 931 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 ZNF277Q9NRM2 450 aaPredicted RBP13.45□□□□□ -0.26
CASQ2-201ENST00000261448 SPTLC3Q9NUV7 552 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 FANCLQ9NW38 375 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 TMEM260Q9NX78 707 aa13.45□□□□□ -0.26
CASQ2-201ENST00000261448 TPM4P67936 248 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 NONOQ15233 471 aaKnown RBP eCLIP13.44□□□□□ -0.26
CASQ2-201ENST00000261448 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 IQUBQ8NA54 791 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 ATRNL1Q5VV63 1379 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 PNMA6FA0A0J9YX94 578 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 hCG_1984214I3L0E3 225 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 ENTPD3O75355 529 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 RAD17O75943 681 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 JAG1P78504 1218 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 FANCCQ00597 558 aa13.44□□□□□ -0.26
CASQ2-201ENST00000261448 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms