RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 FEM1BQ9UK73 627 aa20.08■□□□□ 0.81
CGREF1-201ENST00000260595 SZT2Q5T011 3432 aa20.08■□□□□ 0.8
CGREF1-201ENST00000260595 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
CGREF1-201ENST00000260595 ATN1P54259 1190 aaPredicted RBP20.07■□□□□ 0.8
CGREF1-201ENST00000260595 SLFN13Q68D06 897 aa20.07■□□□□ 0.8
CGREF1-201ENST00000260595 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.07■□□□□ 0.8
CGREF1-201ENST00000260595 KIFC2Q96AC6 838 aa20.07■□□□□ 0.8
CGREF1-201ENST00000260595 DNAJC25-GNG10A0A024R161 153 aa20.06■□□□□ 0.8
CGREF1-201ENST00000260595 ZBED4O75132 1171 aa20.06■□□□□ 0.8
CGREF1-201ENST00000260595 ZNF865P0CJ78 1059 aaPredicted RBP20.06■□□□□ 0.8
CGREF1-201ENST00000260595 CTDSPL2Q05D32 466 aa20.06■□□□□ 0.8
CGREF1-201ENST00000260595 LRRC41Q15345 812 aa20.06■□□□□ 0.8
CGREF1-201ENST00000260595 CPXCR1Q8N123 301 aa20.06■□□□□ 0.8
CGREF1-201ENST00000260595 LRCH3Q96II8 777 aa20.06■□□□□ 0.8
CGREF1-201ENST00000260595 RAVER2Q9HCJ3 691 aaKnown RBP20.06■□□□□ 0.8
CGREF1-201ENST00000260595 IL17RBQ9NRM6 502 aa20.06■□□□□ 0.8
CGREF1-201ENST00000260595 HELLSQ9NRZ9 838 aa20.06■□□□□ 0.8
CGREF1-201ENST00000260595 ANAPC4Q9UJX5 808 aa20.06■□□□□ 0.8
CGREF1-201ENST00000260595 BMP3P12645 472 aa20.05■□□□□ 0.8
CGREF1-201ENST00000260595 AAMPQ13685 434 aa20.05■□□□□ 0.8
CGREF1-201ENST00000260595 ALX1Q15699 326 aa20.05■□□□□ 0.8
CGREF1-201ENST00000260595 SLC39A5Q6ZMH5 540 aa20.05■□□□□ 0.8
CGREF1-201ENST00000260595 SMC5Q8IY18 1101 aa20.05■□□□□ 0.8
CGREF1-201ENST00000260595 FAM227BQ96M60 508 aa20.05■□□□□ 0.8
CGREF1-201ENST00000260595 YTHDC1Q96MU7 727 aaKnown RBP20.05■□□□□ 0.8
CGREF1-201ENST00000260595 ZNFX1Q9P2E3 1918 aaKnown RBP20.05■□□□□ 0.8
CGREF1-201ENST00000260595 KBTBD13C9JR72 458 aa20.04■□□□□ 0.8
CGREF1-201ENST00000260595 FGRP09769 529 aa20.04■□□□□ 0.8
CGREF1-201ENST00000260595 NOVP48745 357 aa20.04■□□□□ 0.8
CGREF1-201ENST00000260595 OAZ1P54368 228 aa20.04■□□□□ 0.8
CGREF1-201ENST00000260595 RTP1P59025 263 aa20.04■□□□□ 0.8
CGREF1-201ENST00000260595 TICAM2Q86XR7 235 aa20.04■□□□□ 0.8
CGREF1-201ENST00000260595 TDHQ8IZJ6 230 aa20.04■□□□□ 0.8
CGREF1-201ENST00000260595 MSL3Q8N5Y2 521 aaKnown RBP20.04■□□□□ 0.8
CGREF1-201ENST00000260595 GMCL1Q96IK5 515 aa20.04■□□□□ 0.8
CGREF1-201ENST00000260595 UBE2OQ9C0C9 1292 aaKnown RBP20.04■□□□□ 0.8
CGREF1-201ENST00000260595 LNPKQ9C0E8 428 aa20.04■□□□□ 0.8
CGREF1-201ENST00000260595 A0A0D9SFI3 127 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 TMEM232C9JQI7 657 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 NMT2O60551 498 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 SNAI1O95863 264 aaPredicted RBP20.03■□□□□ 0.8
CGREF1-201ENST00000260595 ADCYAP1R1P41586 468 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 SLC4A3P48751 1232 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 MDM2Q00987 491 aaPredicted RBP20.03■□□□□ 0.8
CGREF1-201ENST00000260595 SNX17Q15036 470 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 LRIT3Q3SXY7 679 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 MAMDC4Q6UXC1 1216 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 DDX11Q96FC9 970 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 MYH4Q9Y623 1939 aa20.03■□□□□ 0.8
CGREF1-201ENST00000260595 TSPY2A6NKD2 308 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 IGHDP01880 384 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 FGAP02671 866 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 FDX1P10109 184 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 RARBP10826 455 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 MCCP23508 829 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 MCMDC2Q4G0Z9 681 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 PPP4R3BQ5MIZ7 849 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 ZNF467Q7Z7K2 595 aaPredicted RBP20.02■□□□□ 0.8
CGREF1-201ENST00000260595 CHST13Q8NET6 341 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 STAG1Q8WVM7 1258 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 FGD4Q96M96 766 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 XPNPEP3Q9NQH7 507 aa20.02■□□□□ 0.8
CGREF1-201ENST00000260595 CTDP1Q9Y5B0 961 aaPredicted RBP20.02■□□□□ 0.8
CGREF1-201ENST00000260595 LAMA3Q16787 3333 aa20.02■□□□□ 0.79
CGREF1-201ENST00000260595 SYNGAP1Q96PV0 1343 aa20.02■□□□□ 0.79
CGREF1-201ENST00000260595 ORC4O43929 436 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 PLA2G6O60733 806 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 PGK1P00558 417 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 MYCNP04198 464 aaPredicted RBP20.01■□□□□ 0.79
CGREF1-201ENST00000260595 AKR1A1P14550 325 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 SLC1A4P43007 532 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 STAT2P52630 851 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 C1orf53Q5VUE5 145 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 ZNF589Q86UQ0 364 aaPredicted RBP20.01■□□□□ 0.79
CGREF1-201ENST00000260595 FAM160B2Q86V87 743 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 FERMT2Q96AC1 680 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 RWDD1Q9H446 243 aaPredicted RBP20.01■□□□□ 0.79
CGREF1-201ENST00000260595 FBXO40Q9UH90 709 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 STX8Q9UNK0 236 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 PHF24Q9UPV7 400 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 CNPY2Q9Y2B0 182 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 ATP11BQ9Y2G3 1177 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 ZNF536O15090 1300 aa20.01■□□□□ 0.79
CGREF1-201ENST00000260595 HSPD1P10809 573 aaKnown RBP20■□□□□ 0.79
CGREF1-201ENST00000260595 NMIQ13287 307 aaPredicted RBP20■□□□□ 0.79
CGREF1-201ENST00000260595 RCSD1Q6JBY9 416 aa20■□□□□ 0.79
CGREF1-201ENST00000260595 RASGRP2Q7LDG7 609 aa20■□□□□ 0.79
CGREF1-201ENST00000260595 CHURC1Q8WUH1 139 aa20■□□□□ 0.79
CGREF1-201ENST00000260595 LENG1Q96BZ8 264 aaPredicted RBP20■□□□□ 0.79
CGREF1-201ENST00000260595 CHMP4CQ96CF2 233 aa20■□□□□ 0.79
CGREF1-201ENST00000260595 DNAH12Q6ZR08 3092 aa19.99■□□□□ 0.79
CGREF1-201ENST00000260595 PLXNA1Q9UIW2 1896 aa19.99■□□□□ 0.79
CGREF1-201ENST00000260595 RANBP6O60518 1105 aaKnown RBP19.99■□□□□ 0.79
CGREF1-201ENST00000260595 ADAMTS4O75173 837 aa19.99■□□□□ 0.79
CGREF1-201ENST00000260595 TRIM60Q495X7 471 aa19.99■□□□□ 0.79
CGREF1-201ENST00000260595 B4GALNT3Q6L9W6 998 aa19.99■□□□□ 0.79
CGREF1-201ENST00000260595 GPR153Q6NV75 609 aa19.99■□□□□ 0.79
CGREF1-201ENST00000260595 KCTD1Q719H9 257 aa19.99■□□□□ 0.79
CGREF1-201ENST00000260595 PLEKHM2Q8IWE5 1019 aa19.99■□□□□ 0.79
CGREF1-201ENST00000260595 ANKRD35Q8N283 1001 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms