RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 MMP1P03956 469 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 SYKP43405 635 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 MTMR2Q13614 643 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 MAP3K11Q16584 847 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 MAD2L2Q9UI95 211 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 SERPINA10Q9UK55 444 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 CHD4Q14839 1912 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 A0A0C4DFX4 3053 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 ORC4O43929 436 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 TECP42680 631 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 PNOCQ13519 176 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 ANO6Q4KMQ2 910 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 SMYD4Q8IYR2 804 aaPredicted RBP13.3□□□□□ -0.28
LIN28A-201ENST00000254231 MKRN1Q9UHC7 482 aaKnown RBP13.3□□□□□ -0.28
LIN28A-201ENST00000254231 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 PICK1Q9NRD5 415 aa13.3□□□□□ -0.28
LIN28A-201ENST00000254231 VIL1P09327 827 aaKnown RBP13.29□□□□□ -0.28
LIN28A-201ENST00000254231 CACNB1Q02641 598 aaPredicted RBP13.29□□□□□ -0.28
LIN28A-201ENST00000254231 PKN1Q16512 942 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 DGKHQ86XP1 1220 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 NOL7Q9UMY1 257 aaKnown RBP13.29□□□□□ -0.28
LIN28A-201ENST00000254231 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 CALML3P27482 149 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 TTC38Q5R3I4 469 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 GADL1Q6ZQY3 521 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 BLIDQ8IZY5 108 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 DCPSQ96C86 337 aaKnown RBP13.29□□□□□ -0.28
LIN28A-201ENST00000254231 KANSL2Q9H9L4 492 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 WNK3Q9BYP7 1800 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 GAKO14976 1311 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 MYCLP12524 364 aaPredicted RBP13.29□□□□□ -0.28
LIN28A-201ENST00000254231 IDEP14735 1019 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 LMNB1P20700 586 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 AGXT2Q9BYV1 514 aa13.29□□□□□ -0.28
LIN28A-201ENST00000254231 RAVER2Q9HCJ3 691 aaKnown RBP13.29□□□□□ -0.28
LIN28A-201ENST00000254231 CCDC183Q5T5S1 534 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 TBCKQ8TEA7 893 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 MRPS27Q92552 414 aaKnown RBP13.28□□□□□ -0.28
LIN28A-201ENST00000254231 CSRNP2Q9H175 543 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 RBM28Q9NW13 759 aaKnown RBP13.28□□□□□ -0.28
LIN28A-201ENST00000254231 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 CYP4A11Q02928 519 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 SLC35G1Q2M3R5 365 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 QRICH1Q2TAL8 776 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 LINC00301Q8NCQ3 95 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 SHISA4Q96DD7 197 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 PSTPIP2Q9H939 334 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 ELP3Q9H9T3 547 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 ANAPC4Q9UJX5 808 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 ANKRD36CQ5JPF3 1778 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 SALL1Q9NSC2 1324 aa13.28□□□□□ -0.28
LIN28A-201ENST00000254231 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 PFKFB1P16118 471 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 KARSQ15046 597 aaKnown RBP13.27□□□□□ -0.28
LIN28A-201ENST00000254231 CDC37Q16543 378 aaPredicted RBP13.27□□□□□ -0.28
LIN28A-201ENST00000254231 DHX36Q9H2U1 1008 aaKnown RBP13.27□□□□□ -0.28
LIN28A-201ENST00000254231 ARHGEF10LQ9HCE6 1279 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 TBC1D7Q9P0N9 293 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 C4AP0C0L4 1744 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 ZNF202O95125 648 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 BMP3P12645 472 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 REXO1Q8N1G1 1221 aaKnown RBP13.27□□□□□ -0.28
LIN28A-201ENST00000254231 PSMD1Q99460 953 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 TRIM5Q9C035 493 aa13.27□□□□□ -0.28
LIN28A-201ENST00000254231 FILIP1Q7Z7B0 1213 aa13.27□□□□□ -0.29
LIN28A-201ENST00000254231 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.29
LIN28A-201ENST00000254231 TRMT44Q8IYL2 757 aaKnown RBP13.27□□□□□ -0.29
LIN28A-201ENST00000254231 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
LIN28A-201ENST00000254231 RNF26Q9BY78 433 aaPredicted RBP13.27□□□□□ -0.29
LIN28A-201ENST00000254231 C6orf50Q9HD87 102 aa13.27□□□□□ -0.29
LIN28A-201ENST00000254231 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.27□□□□□ -0.29
LIN28A-201ENST00000254231 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
LIN28A-201ENST00000254231 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 TDP2O95551 362 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 UBA7P41226 1012 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 PRR16Q569H4 304 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 KIAA1755Q5JYT7 1200 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 SERTAD1Q9UHV2 236 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 RGL2O15211 777 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 TOB1P50616 345 aaPredicted RBP13.26□□□□□ -0.29
LIN28A-201ENST00000254231 HIRAP54198 1017 aaPredicted RBP13.26□□□□□ -0.29
LIN28A-201ENST00000254231 DYMQ7RTS9 669 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 CLMNQ96JQ2 1002 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 RRAGCQ9HB90 399 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 DDAH1O94760 285 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 GNAQP50148 359 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 C15orf52Q6ZUT6 534 aaKnown RBP13.26□□□□□ -0.29
LIN28A-201ENST00000254231 CDK5RAP3Q96JB5 506 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 JMJD4Q9H9V9 463 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 TCEAL9Q9UHQ7 104 aa13.26□□□□□ -0.29
LIN28A-201ENST00000254231 ZNF165P49910 485 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 LONRF3Q496Y0 759 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 JMYQ8N9B5 988 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 FAM151AQ8WW52 585 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 FAM163AQ96GL9 167 aaPredicted RBP13.25□□□□□ -0.29
LIN28A-201ENST00000254231 KCNH3Q9ULD8 1083 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 MEIS1O00470 390 aa13.25□□□□□ -0.29
LIN28A-201ENST00000254231 PRPF3O43395 683 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms