RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
SNRPA1-201ENST00000254193 SLC25A27O95847 323 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 HMGCRP04035 888 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 EN2P19622 333 aaPredicted RBP21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 SLC4A3P48751 1232 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 CCDC178Q5BJE1 867 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 STOX1Q6ZVD7 989 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 CYB5R4Q7L1T6 521 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 FAM160B2Q86V87 743 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 CPXCR1Q8N123 301 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 APBA2Q99767 749 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 TEX13BQ9BXU2 312 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 RNF208Q9H0X6 261 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 SLC38A10Q9HBR0 1119 aa21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 RAVER2Q9HCJ3 691 aaKnown RBP21.12■□□□□ 0.97
SNRPA1-201ENST00000254193 FRMPD2Q68DX3 1309 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 E7EWF7 191 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 STRNO43815 780 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 ADORA2AP29274 412 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 TRDNQ13061 729 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 SNRNP48Q6IEG0 339 aaKnown RBP21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 TTBK2Q6IQ55 1244 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 CASC1Q6TDU7 716 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 ENAHQ8N8S7 591 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 ANKS1AQ92625 1134 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 UBAC1Q9BSL1 405 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 GPCPD1Q9NPB8 672 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 RIPK3Q9Y572 518 aa21.11■□□□□ 0.97
SNRPA1-201ENST00000254193 TNKSO95271 1327 aa21.1■□□□□ 0.97
SNRPA1-201ENST00000254193 RLFQ13129 1914 aa21.1■□□□□ 0.97
SNRPA1-201ENST00000254193 ATP2A1O14983 1001 aa21.1■□□□□ 0.97
SNRPA1-201ENST00000254193 PLA2G6O60733 806 aa21.1■□□□□ 0.97
SNRPA1-201ENST00000254193 PDHBP11177 359 aa21.1■□□□□ 0.97
SNRPA1-201ENST00000254193 ZKSCAN1P17029 563 aaPredicted RBP21.1■□□□□ 0.97
SNRPA1-201ENST00000254193 SLC16A2P36021 539 aa21.1■□□□□ 0.97
SNRPA1-201ENST00000254193 SNAP25P60880 206 aa21.1■□□□□ 0.97
SNRPA1-201ENST00000254193 NPLOC4Q8TAT6 608 aa21.1■□□□□ 0.97
SNRPA1-201ENST00000254193 COBLO75128 1261 aa21.09■□□□□ 0.97
SNRPA1-201ENST00000254193 HOXC6P09630 235 aa21.09■□□□□ 0.97
SNRPA1-201ENST00000254193 FCER1AP12319 257 aa21.09■□□□□ 0.97
SNRPA1-201ENST00000254193 RALYLQ86SE5 291 aaKnown RBP21.09■□□□□ 0.97
SNRPA1-201ENST00000254193 DPP9Q86TI2 863 aa21.09■□□□□ 0.97
SNRPA1-201ENST00000254193 PNMA1Q8ND90 353 aa21.09■□□□□ 0.97
SNRPA1-201ENST00000254193 KAT14Q9H8E8 782 aa21.09■□□□□ 0.97
SNRPA1-201ENST00000254193 FLRT1Q9NZU1 646 aa21.09■□□□□ 0.97
SNRPA1-201ENST00000254193 PRR12Q9ULL5 1215 aa21.09■□□□□ 0.97
SNRPA1-201ENST00000254193 SLC27A2O14975 620 aa21.08■□□□□ 0.97
SNRPA1-201ENST00000254193 SNHG28P0DPA3 235 aa21.08■□□□□ 0.97
SNRPA1-201ENST00000254193 MLLT1Q03111 559 aaPredicted RBP21.08■□□□□ 0.97
SNRPA1-201ENST00000254193 ZNF543Q08ER8 600 aa21.08■□□□□ 0.97
SNRPA1-201ENST00000254193 TRMT44Q8IYL2 757 aaKnown RBP21.08■□□□□ 0.97
SNRPA1-201ENST00000254193 ABRAQ8N0Z2 381 aa21.08■□□□□ 0.97
SNRPA1-201ENST00000254193 NCOA7Q8NI08 942 aa21.08■□□□□ 0.97
SNRPA1-201ENST00000254193 MMP19Q99542 508 aa21.08■□□□□ 0.97
SNRPA1-201ENST00000254193 MGAMO43451 1857 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 A0A0G2JMZ2 1700 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 GJB1P08034 283 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 FDX1P10109 184 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 PRKAR2AP13861 404 aaKnown RBP21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 COPB2P35606 906 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 OAZ1P54368 228 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 KCTD2Q14681 263 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 NECTIN1Q15223 517 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 CREB3L3Q68CJ9 461 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 CCDC174Q6PII3 467 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 BTNL9Q6UXG8 535 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 CHST3Q7LGC8 479 aa21.07■□□□□ 0.96
SNRPA1-201ENST00000254193 ZNF536O15090 1300 aa21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 PGK2P07205 417 aa21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 GOLGA8HP0CJ92 632 aa21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 SEC23AQ15436 765 aa21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 IFIT1BQ5T764 474 aaKnown RBP21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 MAP3K21Q5TCX8 1036 aa21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 SYDE2Q5VT97 1194 aa21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 AGBL1Q96MI9 1066 aa21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 DEFB118Q96PH6 123 aa21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 HOMER2Q9NSB8 354 aa21.06■□□□□ 0.96
SNRPA1-201ENST00000254193 IFIT3O14879 490 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-201ENST00000254193 CACNB2Q08289 660 aaPredicted RBP21.05■□□□□ 0.96
SNRPA1-201ENST00000254193 MB21D2Q8IYB1 491 aaPredicted RBP21.05■□□□□ 0.96
SNRPA1-201ENST00000254193 U2AF1L4Q8WU68 220 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-201ENST00000254193 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.05■□□□□ 0.96
SNRPA1-201ENST00000254193 HMX1Q9NP08 348 aaPredicted RBP21.05■□□□□ 0.96
SNRPA1-201ENST00000254193 PAK6Q9NQU5 681 aaPredicted RBP21.05■□□□□ 0.96
SNRPA1-201ENST00000254193 RPTORQ8N122 1335 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 CYP2C19P33261 490 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 GJA8P48165 433 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 ANTXR2P58335 489 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 MFSD14CQ5VZR4 134 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 SHISA4Q96DD7 197 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 CPVLQ9H3G5 476 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 SENP2Q9HC62 589 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 SLC5A4Q9NY91 659 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 DOCK3Q8IZD9 2030 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 LAMA4Q16363 1823 aa21.04■□□□□ 0.96
SNRPA1-201ENST00000254193 TAL1P17542 331 aaPredicted RBP21.03■□□□□ 0.96
SNRPA1-201ENST00000254193 COL9A3Q14050 684 aaPredicted RBP21.03■□□□□ 0.96
SNRPA1-201ENST00000254193 GPATCH4Q5T3I0 446 aaKnown RBP21.03■□□□□ 0.96
SNRPA1-201ENST00000254193 CHST13Q8NET6 341 aa21.03■□□□□ 0.96
SNRPA1-201ENST00000254193 UBA5Q9GZZ9 404 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms