RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SYT10Q6XYQ8 523 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 IQUBQ8NA54 791 aa17.87■□□□□ 0.45
LRFN1-201ENST00000248668 SYNRGQ9UMZ2 1314 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 G3V3G9 751 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 LETM2Q2VYF4 491 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 DCAF8Q5TAQ9 597 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 RRAGBQ5VZM2 374 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 CERS5Q8N5B7 392 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 SPATA20Q8TB22 786 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 PIGSQ96S52 555 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 TTF2Q9UNY4 1162 aaKnown RBP17.86■□□□□ 0.45
LRFN1-201ENST00000248668 ZNF18P17022 549 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 GNAQP50148 359 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 C15orf52Q6ZUT6 534 aaKnown RBP17.86■□□□□ 0.45
LRFN1-201ENST00000248668 SH3RF1Q7Z6J0 888 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 PDCL2Q8N4E4 241 aa17.86■□□□□ 0.45
LRFN1-201ENST00000248668 PALM3A6NDB9 673 aaPredicted RBP17.85■□□□□ 0.45
LRFN1-201ENST00000248668 ELOA2Q8IYF1 753 aaPredicted RBP17.85■□□□□ 0.45
LRFN1-201ENST00000248668 SNED1Q8TER0 1413 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 ZC3H12CQ9C0D7 883 aaKnown RBP17.85■□□□□ 0.45
LRFN1-201ENST00000248668 DDX4Q9NQI0 724 aaKnown RBP17.85■□□□□ 0.45
LRFN1-201ENST00000248668 KCNQ5Q9NR82 932 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 ROBO3Q96MS0 1386 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 JAKMIP3Q5VZ66 844 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 TRIML1Q8N9V2 468 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 ZNF287Q9HBT7 754 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 BARHL2Q9NY43 387 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 MAST2Q6P0Q8 1798 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 CCT6AP40227 531 aaKnown RBP17.85■□□□□ 0.45
LRFN1-201ENST00000248668 STAT6P42226 847 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 CACNB3P54284 484 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 E2F4Q16254 413 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 DPP8Q6V1X1 898 aaPredicted RBP17.85■□□□□ 0.45
LRFN1-201ENST00000248668 GPCPD1Q9NPB8 672 aa17.85■□□□□ 0.45
LRFN1-201ENST00000248668 DLEC1Q9Y238 1755 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 TRAPPC10P48553 1259 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 DHX8Q14562 1220 aaKnown RBP17.84■□□□□ 0.45
LRFN1-201ENST00000248668 SLC27A3Q5K4L6 730 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 C4orf32Q8N8J7 132 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 NEDD1Q8NHV4 660 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 ANKS1AQ92625 1134 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 BIN2Q9UBW5 565 aaPredicted RBP17.84■□□□□ 0.45
LRFN1-201ENST00000248668 GDAQ9Y2T3 454 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 PAXBP1Q9Y5B6 917 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 SMCO2A6NFE2 343 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 AKR1B1P15121 316 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 PDXDC2PQ6P474 469 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 DTHD1Q6ZMT9 781 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 ZNF622Q969S3 477 aaKnown RBP eCLIP17.84■□□□□ 0.45
LRFN1-201ENST00000248668 EEF2KMTQ96G04 330 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 TRERF1Q96PN7 1200 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 DBNDD1Q9H9R9 158 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 PCDHAC2Q9Y5I4 1007 aa17.84■□□□□ 0.45
LRFN1-201ENST00000248668 FAM196BA6NMK8 535 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 PLCG2P16885 1265 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.45
LRFN1-201ENST00000248668 PPP1R3GB7ZBB8 358 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 CCNT1O60563 726 aaKnown RBP17.83■□□□□ 0.45
LRFN1-201ENST00000248668 COL23A1Q86Y22 540 aaPredicted RBP17.83■□□□□ 0.45
LRFN1-201ENST00000248668 CCDC148Q8NFR7 591 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 KIF18AQ8NI77 898 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 TBC1D22AQ8WUA7 517 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 COA7Q96BR5 231 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 UIMC1Q96RL1 719 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 CRAMP1Q96RY5 1269 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 TCP11L1Q9NUJ3 509 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 TMEM260Q9NX78 707 aa17.83■□□□□ 0.45
LRFN1-201ENST00000248668 ZNF215Q9UL58 517 aaPredicted RBP17.83■□□□□ 0.45
LRFN1-201ENST00000248668 UBR3Q6ZT12 1888 aa17.83■□□□□ 0.44
LRFN1-201ENST00000248668 MPHOSPH10O00566 681 aaKnown RBP17.83■□□□□ 0.44
LRFN1-201ENST00000248668 GSDMAQ96QA5 445 aa17.83■□□□□ 0.44
LRFN1-201ENST00000248668 SEC63Q9UGP8 760 aaKnown RBP17.83■□□□□ 0.44
LRFN1-201ENST00000248668 TXLNAP40222 546 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 NCBP1Q09161 790 aaKnown RBP17.82■□□□□ 0.44
LRFN1-201ENST00000248668 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 DESI2Q9BSY9 194 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 USP40Q9NVE5 1235 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 NAV1Q8NEY1 1877 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 UBA7P41226 1012 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 CCDC178Q5BJE1 867 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 TMED8Q6PL24 325 aaPredicted RBP17.82■□□□□ 0.44
LRFN1-201ENST00000248668 RRP36Q96EU6 259 aaKnown RBP17.82■□□□□ 0.44
LRFN1-201ENST00000248668 MMP10P09238 476 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 ERCC5P28715 1186 aaPredicted RBP17.82■□□□□ 0.44
LRFN1-201ENST00000248668 TCP10Q12799 353 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 SPATA1Q5VX52 437 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 SLF2Q8IX21 1173 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 SH3GLB2Q9NR46 395 aa17.82■□□□□ 0.44
LRFN1-201ENST00000248668 M0R2N6 131 aa17.81■□□□□ 0.44
LRFN1-201ENST00000248668 DNAI1Q9UI46 699 aa17.81■□□□□ 0.44
LRFN1-201ENST00000248668 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
LRFN1-201ENST00000248668 GAKO14976 1311 aa17.81■□□□□ 0.44
LRFN1-201ENST00000248668 CTIFO43310 598 aaKnown RBP17.81■□□□□ 0.44
LRFN1-201ENST00000248668 SOGA3Q5TF21 947 aa17.81■□□□□ 0.44
LRFN1-201ENST00000248668 SP8Q8IXZ3 490 aa17.81■□□□□ 0.44
LRFN1-201ENST00000248668 ZBTB9Q96C00 473 aa17.81■□□□□ 0.44
LRFN1-201ENST00000248668 BAG1Q99933 345 aaPredicted RBP17.81■□□□□ 0.44
LRFN1-201ENST00000248668 APBA3O96018 575 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 NFIAQ12857 509 aa17.8■□□□□ 0.44
LRFN1-201ENST00000248668 MTF1Q14872 753 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms