RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 NAA15Q9BXJ9 866 aaKnown RBP12.9□□□□□ -0.34
SOX9-201ENST00000245479 GDAQ9Y2T3 454 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 MACROD2A1Z1Q3 448 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 MYO1BO43795 1136 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 CLNS1AP54105 237 aaKnown RBP12.9□□□□□ -0.34
SOX9-201ENST00000245479 RILPL1Q5EBL4 403 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 KCNB2Q92953 911 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 LUC7L2Q9Y383 392 aaKnown RBP12.9□□□□□ -0.34
SOX9-201ENST00000245479 UBR1Q8IWV7 1749 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 CCNT1O60563 726 aaKnown RBP12.9□□□□□ -0.34
SOX9-201ENST00000245479 H2AFXP16104 143 aaPredicted RBP12.9□□□□□ -0.34
SOX9-201ENST00000245479 VAV2P52735 878 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 KRT83P78385 493 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 ZYXQ15942 572 aaKnown RBP12.9□□□□□ -0.34
SOX9-201ENST00000245479 TADA2BQ86TJ2 420 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 SLC35F6Q8N357 371 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 MLKLQ8NB16 471 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 ANKRD26Q9UPS8 1709 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 TNS3Q68CZ2 1445 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 CUTAO60888 179 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 PPFIA4O75335 1185 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 SLC16A2P36021 539 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 MUM1L1Q5H9M0 696 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 TOGARAM2Q6ZUX3 1019 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 CACNA2D4Q7Z3S7 1137 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 ACRBPQ8NEB7 543 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 NCAPGQ9BPX3 1015 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 MXD3Q9BW11 206 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 TACC1O75410 805 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 MMP1P03956 469 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
SOX9-201ENST00000245479 GTF2IP78347 998 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 WHAMMP3Q1A5X7 153 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 A0A0U1RQJ8 604 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 TECP42680 631 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 JPH2Q9BR39 696 aaPredicted RBP12.89□□□□□ -0.35
SOX9-201ENST00000245479 CAPS2Q9BXY5 557 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 SEC63Q9UGP8 760 aaKnown RBP12.89□□□□□ -0.35
SOX9-201ENST00000245479 SAMM50Q9Y512 469 aa12.89□□□□□ -0.35
SOX9-201ENST00000245479 A0A1W2PQ27 194 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 A0A1W2PQ64 194 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 A0A1W2PQD8 194 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 NEBLO76041 1014 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 CSF1RP07333 972 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 CASP14P31944 242 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 NFIXQ14938 502 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 TMTC1Q8IUR5 882 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 PKD2L1Q9P0L9 805 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 WNT7AO00755 349 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 IKBKBO14920 756 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 ATP1A2P50993 1020 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 FAM196AQ6ZSG2 479 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 DYDC1Q8WWB3 177 aa12.88□□□□□ -0.35
SOX9-201ENST00000245479 MAP2K1Q02750 393 aaPredicted RBP12.88□□□□□ -0.35
SOX9-201ENST00000245479 SF3A3Q12874 501 aaKnown RBP eCLIP12.88□□□□□ -0.353e-6■■□□□ 12.9
SOX9-201ENST00000245479 TBC1D10BQ4KMP7 808 aaPredicted RBP12.88□□□□□ -0.35
SOX9-201ENST00000245479 CPDO75976 1380 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 CYP26C1Q6V0L0 522 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 FAM84BQ96KN1 310 aaPredicted RBP12.87□□□□□ -0.35
SOX9-201ENST00000245479 CCDC42Q96M95 316 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 WDR24Q96S15 920 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
SOX9-201ENST00000245479 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 PALLDQ8WX93 1383 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 LRRC41Q15345 812 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 CPLX4Q7Z7G2 160 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 COA7Q96BR5 231 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 CUL4BQ13620 913 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 PLS1Q14651 629 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 NCAPD2Q15021 1401 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 TMTC2Q8N394 836 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 FNBP4Q8N3X1 1017 aaPredicted RBP12.87□□□□□ -0.35
SOX9-201ENST00000245479 L2HGDHQ9H9P8 463 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 SAR1BQ9Y6B6 198 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 SYNRGQ9UMZ2 1314 aa12.87□□□□□ -0.35
SOX9-201ENST00000245479 FMNL1O95466 1100 aaPredicted RBP12.86□□□□□ -0.35
SOX9-201ENST00000245479 ARID4AP29374 1257 aaPredicted RBP12.86□□□□□ -0.35
SOX9-201ENST00000245479 RBL2Q08999 1139 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 CEP85LQ5SZL2 805 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 IFNAR1P17181 557 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 TOB1P50616 345 aaPredicted RBP12.86□□□□□ -0.35
SOX9-201ENST00000245479 SARNPP82979 210 aaKnown RBP12.86□□□□□ -0.35
SOX9-201ENST00000245479 DTHD1Q6ZMT9 781 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 NELFCDQ8IXH7 590 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 ARFGAP2Q8N6H7 521 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
SOX9-201ENST00000245479 GOPCQ9HD26 462 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 MON2Q7Z3U7 1717 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 PXDNLA1KZ92 1463 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 MFSD14BQ5SR56 506 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 TCERG1LQ5VWI1 586 aa12.86□□□□□ -0.35
SOX9-201ENST00000245479 RSRC1Q96IZ7 334 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms