RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TPM2P07951 284 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 SPP2Q13103 211 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 KCTD1Q719H9 257 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 FEZ1Q99689 392 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 TTC12Q9H892 705 aaPredicted RBP19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 ARHGEF10LQ9HCE6 1279 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 CSADQ9Y600 493 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 F5H6K3 240 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 PDHBP11177 359 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 KLRC3Q07444 240 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 CST9Q5W186 159 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 NBPF11Q86T75 865 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 CTCFLQ8NI51 663 aaPredicted RBP19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 GPCPD1Q9NPB8 672 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 MAD2L2Q9UI95 211 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 ANO6Q4KMQ2 910 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 ARMC9Q7Z3E5 817 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 LUZP1Q86V48 1076 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 MKL1Q969V6 931 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 USP28Q96RU2 1077 aa19.5■□□□□ 0.71
CDKN1A-201ENST00000244741 OTOFQ9HC10 1997 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 MTMR2Q13614 643 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 CCDC96Q2M329 555 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 SLFN13Q68D06 897 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 ZNF784Q8NCA9 323 aaPredicted RBP19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 UBA5Q9GZZ9 404 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 CBX8Q9HC52 389 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 DOCK1Q14185 1865 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 NDUFB10O96000 172 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 TTBK2Q6IQ55 1244 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 SAMD1Q6SPF0 538 aaPredicted RBP19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 ANKRD13AQ8IZ07 590 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 OTUD5Q96G74 571 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 GBA2Q9HCG7 927 aaPredicted RBP19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 TMX2Q9Y320 296 aa19.49■□□□□ 0.71
CDKN1A-201ENST00000244741 PARP1P09874 1014 aaKnown RBP19.48■□□□□ 0.71
CDKN1A-201ENST00000244741 CALM1P0DP23 149 aa19.48■□□□□ 0.71
CDKN1A-201ENST00000244741 CALM2P0DP24 149 aa19.48■□□□□ 0.71
CDKN1A-201ENST00000244741 CALM3P0DP25 149 aa19.48■□□□□ 0.71
CDKN1A-201ENST00000244741 GRM4Q14833 912 aa19.48■□□□□ 0.71
CDKN1A-201ENST00000244741 SRBD1Q8N5C6 995 aaKnown RBP19.48■□□□□ 0.71
CDKN1A-201ENST00000244741 SLC16A2P36021 539 aa19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 SLC1A4P43007 532 aa19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 TERF1P54274 439 aa19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 NTRK3Q16288 839 aa19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 CCAR1Q8IX12 1150 aaKnown RBP19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 ZNF396Q96N95 335 aaPredicted RBP19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 VAT1LQ9HCJ6 419 aa19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 MKRN3Q13064 507 aaKnown RBP19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 PPP4R3BQ5MIZ7 849 aa19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 NOL9Q5SY16 702 aaKnown RBP19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 ZNF280CQ8ND82 737 aa19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 SLC26A6Q9BXS9 759 aa19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 GOLPH3LQ9H4A5 285 aa19.47■□□□□ 0.71
CDKN1A-201ENST00000244741 KLRF2D3W0D1 207 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 DHX16O60231 1041 aaKnown RBP19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 SLC35G1Q2M3R5 365 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 ATL3Q6DD88 541 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 OTUD7BQ6GQQ9 843 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 SASS6Q6UVJ0 657 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 PALM3A6NDB9 673 aaPredicted RBP19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 USP17L10C9JJH3 530 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 KIF5BP33176 963 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 HMGCS2P54868 508 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 FAM83BQ5T0W9 1011 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 TMTC3Q6ZXV5 915 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 C2orf69Q8N8R5 385 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 AIFM3Q96NN9 605 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 GOPCQ9HD26 462 aa19.46■□□□□ 0.71
CDKN1A-201ENST00000244741 IRF6O14896 467 aa19.45■□□□□ 0.7
CDKN1A-201ENST00000244741 ZNF543Q08ER8 600 aa19.45■□□□□ 0.7
CDKN1A-201ENST00000244741 SPC24Q8NBT2 197 aa19.45■□□□□ 0.7
CDKN1A-201ENST00000244741 GMCL1P1Q8NEA9 526 aa19.45■□□□□ 0.7
CDKN1A-201ENST00000244741 VCPKMTQ9H867 229 aa19.45■□□□□ 0.7
CDKN1A-201ENST00000244741 AFG3L2Q9Y4W6 797 aa19.45■□□□□ 0.7
CDKN1A-201ENST00000244741 CCDC196A0A1B0GTZ2 297 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 SNHG28P0DPA3 235 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 RCAN1P53805 252 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 LDLRAD1Q5T700 205 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 C17orf53Q8N3J3 647 aaPredicted RBP19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 OPTNQ96CV9 577 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 SLC10A4Q96EP9 437 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 DNAJC25Q9H1X3 360 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 AS3MTQ9HBK9 375 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 EMILIN3Q9NT22 766 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 GJB4Q9NTQ9 266 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 V9GY48 417 aaPredicted RBP19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 CYTH3O43739 400 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 BACE1P56817 501 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 SNAP25P60880 206 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 IKQ13123 557 aaPredicted RBP19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 SNW1Q13573 536 aaKnown RBP19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 SMC1BQ8NDV3 1235 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 GINM1Q9NU53 330 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 ORC3Q9UBD5 711 aaPredicted RBP19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 NID2Q14112 1375 aa19.44■□□□□ 0.7
CDKN1A-201ENST00000244741 TMEM232C9JQI7 657 aa19.43■□□□□ 0.7
CDKN1A-201ENST00000244741 FUT2Q10981 343 aa19.43■□□□□ 0.7
CDKN1A-201ENST00000244741 CPLX2Q6PUV4 134 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms