RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 CFAP54Q96N23 3096 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 ZNFX1Q9P2E3 1918 aaKnown RBP10.14□□□□□ -0.79
IFT43-201ENST00000238628 IPO8O15397 1037 aaKnown RBP10.14□□□□□ -0.79
IFT43-201ENST00000238628 KCNA5P22460 613 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 ZAP70P43403 619 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 CDK7P50613 346 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 OS9Q13438 667 aaPredicted RBP10.14□□□□□ -0.79
IFT43-201ENST00000238628 KCNA10Q16322 511 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 ABCB5Q2M3G0 1257 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 CERKLQ49MI3 558 aaPredicted RBP10.14□□□□□ -0.79
IFT43-201ENST00000238628 TNNI3KQ59H18 835 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 TTC6Q86TZ1 520 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 FAM86C1Q9NVL1 165 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 SERPINB13Q9UIV8 391 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 FPGT-TNNI3KV9GXZ4 949 aa10.14□□□□□ -0.79
IFT43-201ENST00000238628 ELP1O95163 1332 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.13□□□□□ -0.79
IFT43-201ENST00000238628 ADAMTS4O75173 837 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 AKR1A1P14550 325 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 VCAM1P19320 739 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 ID4P47928 161 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 CCL23P55773 120 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 LBX2Q6XYB7 198 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 RPUSD2Q8IZ73 545 aaKnown RBP10.13□□□□□ -0.79
IFT43-201ENST00000238628 MIGA1Q8NAN2 632 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 ACER1Q8TDN7 264 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 LENG1Q96BZ8 264 aaPredicted RBP10.13□□□□□ -0.79
IFT43-201ENST00000238628 MAML3Q96JK9 1138 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 ZNF512BQ96KM6 892 aaPredicted RBP10.13□□□□□ -0.79
IFT43-201ENST00000238628 KIAA1683Q9H0B3 1180 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 RPAP3Q9H6T3 665 aaPredicted RBP10.13□□□□□ -0.79
IFT43-201ENST00000238628 PIH1D3Q9NQM4 214 aaKnown RBP10.13□□□□□ -0.79
IFT43-201ENST00000238628 NRBP1Q9UHY1 535 aa10.13□□□□□ -0.79
IFT43-201ENST00000238628 GRXCR2A6NFK2 248 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 SPDYE16A6NNV3 312 aaPredicted RBP10.12□□□□□ -0.79
IFT43-201ENST00000238628 ARVCFO00192 962 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 SURF6O75683 361 aaKnown RBP10.12□□□□□ -0.79
IFT43-201ENST00000238628 IDH1O75874 414 aaKnown RBP10.12□□□□□ -0.79
IFT43-201ENST00000238628 ERCC3P19447 782 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 ATP8B2P98198 1209 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 TAP1Q03518 808 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 TCF15Q12870 199 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 COG2Q14746 738 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 CERS3Q8IU89 383 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 FAM126BQ8IXS8 530 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 FRAT1Q92837 279 aaPredicted RBP10.12□□□□□ -0.79
IFT43-201ENST00000238628 MOV10L1Q9BXT6 1211 aaKnown RBP10.12□□□□□ -0.79
IFT43-201ENST00000238628 UPF3BQ9BZI7 483 aaKnown RBP10.12□□□□□ -0.79
IFT43-201ENST00000238628 EHD4Q9H223 541 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 HIPK3Q9H422 1215 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 HOXC10Q9NYD6 342 aa10.12□□□□□ -0.79
IFT43-201ENST00000238628 A0A0U1RQG5 324 aaPredicted RBP10.11□□□□□ -0.79
IFT43-201ENST00000238628 BCAR3O75815 825 aa10.11□□□□□ -0.79
IFT43-201ENST00000238628 POLR3DP05423 398 aaPredicted RBP10.11□□□□□ -0.79
IFT43-201ENST00000238628 TRIM27P14373 513 aa10.11□□□□□ -0.79
IFT43-201ENST00000238628 TAL1P17542 331 aaPredicted RBP10.11□□□□□ -0.79
IFT43-201ENST00000238628 POLA2Q14181 598 aa10.11□□□□□ -0.79
IFT43-201ENST00000238628 PUS10Q3MIT2 529 aaKnown RBP10.11□□□□□ -0.79
IFT43-201ENST00000238628 MAGEB6Q8N7X4 407 aa10.11□□□□□ -0.79
IFT43-201ENST00000238628 ATOH1Q92858 354 aaPredicted RBP10.11□□□□□ -0.79
IFT43-201ENST00000238628 CLUAP1Q96AJ1 413 aa10.11□□□□□ -0.79
IFT43-201ENST00000238628 CCDC8Q9H0W5 538 aaPredicted RBP10.11□□□□□ -0.79
IFT43-201ENST00000238628 LMCD1Q9NZU5 365 aa10.11□□□□□ -0.79
IFT43-201ENST00000238628 TNNQ9UQP3 1299 aa10.11□□□□□ -0.79
IFT43-201ENST00000238628 UMODL1Q5DID0 1318 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 SYNRGQ9UMZ2 1314 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 KIF28PB7ZC32 967 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 MPHOSPH10O00566 681 aaKnown RBP10.1□□□□□ -0.79
IFT43-201ENST00000238628 LPXNO60711 386 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 ASGR1P07306 291 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 GUCY1A2P33402 732 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 SHMT1P34896 483 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 PLCD1P51178 756 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 SEPT2Q15019 361 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 NCAPG2Q86XI2 1143 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 SUGP1Q8IWZ8 645 aaKnown RBP10.1□□□□□ -0.79
IFT43-201ENST00000238628 PCSK9Q8NBP7 692 aaKnown RBP10.1□□□□□ -0.79
IFT43-201ENST00000238628 SHCBP1Q8NEM2 672 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 KLHDC9Q8NEP7 349 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 SSH3Q8TE77 659 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 SPATC1LQ9H0A9 340 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 IRF2BPLQ9H1B7 796 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 USP34Q70CQ2 3546 aa10.1□□□□□ -0.79
IFT43-201ENST00000238628 RIF1Q5UIP0 2472 aaKnown RBP10.09□□□□□ -0.79
IFT43-201ENST00000238628 ARHGEF15O94989 841 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 CD4P01730 458 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 C6orf222P0C671 652 aaPredicted RBP10.09□□□□□ -0.79
IFT43-201ENST00000238628 ZNF865P0CJ78 1059 aaPredicted RBP10.09□□□□□ -0.79
IFT43-201ENST00000238628 FCER1AP12319 257 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 PLS1Q14651 629 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 PKN1Q16512 942 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 CCSAPQ6IQ19 270 aaPredicted RBP10.09□□□□□ -0.79
IFT43-201ENST00000238628 ABRAQ8N0Z2 381 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 GDPD5Q8WTR4 605 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 PBXIP1Q96AQ6 731 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 EAF2Q96CJ1 260 aaPredicted RBP10.09□□□□□ -0.79
IFT43-201ENST00000238628 TINF2Q9BSI4 451 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 TANGO6Q9C0B7 1094 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 MROH8Q9H579 483 aa10.09□□□□□ -0.79
IFT43-201ENST00000238628 ANTXR1Q9H6X2 564 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms