RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 WDR17Q8IZU2 1322 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 MREGQ8N565 214 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 AGXT2Q9BYV1 514 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 FOXN1O15353 648 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 MYBL1P10243 752 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 SLC7A5Q01650 507 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 ZNF662Q6ZS27 426 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 CREG2Q8IUH2 290 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 YIPF2Q9BWQ6 316 aa14.47□□□□□ -0.09
MSH2-201ENST00000233146 RNF225M0QZC1 329 aaPredicted RBP14.46□□□□□ -0.09
MSH2-201ENST00000233146 PPP6R2O75170 966 aa14.46□□□□□ -0.09
MSH2-201ENST00000233146 VIMP08670 466 aaKnown RBP14.46□□□□□ -0.09
MSH2-201ENST00000233146 MAGEA10P43363 369 aaPredicted RBP14.46□□□□□ -0.09
MSH2-201ENST00000233146 SARSP49591 514 aaKnown RBP14.46□□□□□ -0.09
MSH2-201ENST00000233146 UBE2OQ9C0C9 1292 aaKnown RBP14.46□□□□□ -0.09
MSH2-201ENST00000233146 KIF5BP33176 963 aa14.46□□□□□ -0.09
MSH2-201ENST00000233146 DYNC1I2Q13409 638 aaKnown RBP14.46□□□□□ -0.09
MSH2-201ENST00000233146 LBRQ14739 615 aaKnown RBP14.46□□□□□ -0.09
MSH2-201ENST00000233146 NAF1Q96HR8 494 aaKnown RBP14.46□□□□□ -0.09
MSH2-201ENST00000233146 PHF24Q9UPV7 400 aa14.46□□□□□ -0.09
MSH2-201ENST00000233146 PAEPP09466 180 aa14.46□□□□□ -0.1
MSH2-201ENST00000233146 ERCC5P28715 1186 aaPredicted RBP14.46□□□□□ -0.1
MSH2-201ENST00000233146 MAP3K12Q12852 859 aa14.46□□□□□ -0.1
MSH2-201ENST00000233146 PAK2Q13177 524 aa14.46□□□□□ -0.1
MSH2-201ENST00000233146 SGSM1Q2NKQ1 1148 aa14.46□□□□□ -0.1
MSH2-201ENST00000233146 ANO7Q6IWH7 933 aa14.46□□□□□ -0.1
MSH2-201ENST00000233146 TSHZ1Q6ZSZ6 1077 aa14.46□□□□□ -0.1
MSH2-201ENST00000233146 BIN2Q9UBW5 565 aaPredicted RBP14.46□□□□□ -0.1
MSH2-201ENST00000233146 ERCC6L2Q5T890 1561 aa14.46□□□□□ -0.1
MSH2-201ENST00000233146 LAMA4Q16363 1823 aa14.46□□□□□ -0.1
MSH2-201ENST00000233146 CLTCQ00610 1675 aaKnown RBP14.45□□□□□ -0.1
MSH2-201ENST00000233146 M0R2C6 588 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 CYP21A2P08686 494 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 PLCD1P51178 756 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 CCDC122Q5T0U0 273 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 DPY19L2Q6NUT2 758 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 DHX32Q7L7V1 743 aaKnown RBP14.45□□□□□ -0.1
MSH2-201ENST00000233146 TBC1D1Q86TI0 1168 aaPredicted RBP14.45□□□□□ -0.1
MSH2-201ENST00000233146 CTAGE1Q96RT6 745 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 TMBIM4Q9HC24 238 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 PHF8Q9UPP1 1060 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 COL15A1P39059 1388 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 RBM47A0AV96 593 aaKnown RBP14.45□□□□□ -0.1
MSH2-201ENST00000233146 KIF28PB7ZC32 967 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 CREB3O43889 395 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 HPDP32754 393 aaPredicted RBP14.45□□□□□ -0.1
MSH2-201ENST00000233146 TUBP50607 506 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 HERVK_113P62684 666 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 CDC37Q16543 378 aaPredicted RBP14.45□□□□□ -0.1
MSH2-201ENST00000233146 PABPC1LQ4VXU2 614 aaKnown RBP14.45□□□□□ -0.1
MSH2-201ENST00000233146 HAUS3Q68CZ6 603 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 SPATA4Q8NEY3 305 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 MIPOL1Q8TD10 442 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 CHP1Q99653 195 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 LZTS2Q9BRK4 669 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 FAM208AQ9UK61 1670 aaKnown RBP14.45□□□□□ -0.1
MSH2-201ENST00000233146 CACNA1FO60840 1977 aa14.45□□□□□ -0.1
MSH2-201ENST00000233146 IFIT3O14879 490 aaKnown RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 EVI5O60447 810 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 ATP6V1G1O75348 118 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 SASH1O94885 1247 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 PDIA3P30101 505 aaKnown RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 MRPS35P82673 323 aaKnown RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 ADAM9Q13443 819 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 RASA3Q14644 834 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 ERICH1Q86X53 443 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 CNBD1Q8NA66 436 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 TSPAN18Q96SJ8 248 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 FSD1Q9BTV5 496 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 TAF1DQ9H5J8 278 aaPredicted RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 ZWILCHQ9H900 591 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 DRD4P21917 467 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 VAV2P52735 878 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 TAF11Q15544 211 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 CDKAL1Q5VV42 579 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 STOX1Q6ZVD7 989 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 KIAA0825Q8IV33 1275 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 FNBP4Q8N3X1 1017 aaPredicted RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 RAPGEF5Q92565 580 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 RBM33Q96EV2 1170 aaKnown RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 ZNF274Q96GC6 653 aaPredicted RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 KCNH3Q9ULD8 1083 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 F8W031 263 aaPredicted RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 MRPS25P82663 173 aaKnown RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 EXOSC10Q01780 885 aaKnown RBP14.44□□□□□ -0.1
MSH2-201ENST00000233146 ZNF827Q17R98 1081 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 SPICE1Q8N0Z3 855 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 TRIML1Q8N9V2 468 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 TSPYL4Q9UJ04 414 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 CEP131Q9UPN4 1083 aa14.44□□□□□ -0.1
MSH2-201ENST00000233146 FAM153BP0C7A2 387 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 PTPAQ15257 358 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 FAM153CQ494X1 144 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 SPATA1Q5VX52 437 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 IQCGQ9H095 443 aaKnown RBP14.43□□□□□ -0.1
MSH2-201ENST00000233146 FAM153AQ9UHL3 310 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 ZNF510Q9Y2H8 683 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 EIF4E1BA6NMX2 242 aaKnown RBP14.43□□□□□ -0.1
MSH2-201ENST00000233146 POSTNQ15063 836 aa14.43□□□□□ -0.1
MSH2-201ENST00000233146 IFI16Q16666 785 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms