RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 HPCAL4Q9UM19 191 aa15.83■□□□□ 0.12
PCDHB3-201ENST00000231130 IRF6O14896 467 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 TRIM21P19474 475 aaKnown RBP15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 USP14P54578 494 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 PIK3AP1Q6ZUJ8 805 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 LCORLQ8N3X6 602 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 NFAT5O94916 1531 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 PLEKHA8P1O95397 391 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 EZRP15311 586 aaKnown RBP15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 IFT88Q13099 833 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 SGMS1Q86VZ5 419 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 LRP2BPQ9P2M1 347 aa15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.82■□□□□ 0.12
PCDHB3-201ENST00000231130 MPHOSPH10O00566 681 aaKnown RBP15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 XBP1P17861 261 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 KLK7P49862 253 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 PPFIA1Q13136 1202 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 CDKAL1Q5VV42 579 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 B4GALNT4Q76KP1 1039 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 TEX11Q8IYF3 940 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 TTLL11Q8NHH1 800 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 SELENOOQ9BVL4 669 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 KLC4Q9NSK0 619 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 EHD2Q9NZN4 543 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 REXO2Q9Y3B8 237 aaKnown RBP15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 ANKRD18BA2A2Z9 1011 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 ANKRD13CQ8N6S4 541 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 RRP36Q96EU6 259 aaKnown RBP15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 LACRTQ9GZZ8 138 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 TRMT112Q9UI30 125 aaKnown RBP15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 AFDNP55196 1824 aaKnown RBP15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 KRT2P35908 639 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 PBX1P40424 430 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 NAP1L1P55209 391 aaKnown RBP15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 MAP3K12Q12852 859 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 TCP11X2Q5H9J9 407 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 KRT26Q7Z3Y9 468 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 HDAC7Q8WUI4 952 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 TRIM47Q96LD4 638 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 AGPAT5Q9NUQ2 364 aa15.81■□□□□ 0.12
PCDHB3-201ENST00000231130 LIFRP42702 1097 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 OR8K1Q8NGG5 319 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 PDE2AO00408 941 aaPredicted RBP15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 MEGF6O75095 1541 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 GCFC2P16383 781 aaKnown RBP15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 HLFQ16534 295 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 KIF6Q6ZMV9 814 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 CEP120Q8N960 986 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 COG1Q8WTW3 980 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 GSDMAQ96QA5 445 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 NACAP1Q9BZK3 213 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 KRT23Q9C075 422 aa15.8■□□□□ 0.12
PCDHB3-201ENST00000231130 PRCPP42785 496 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 RNASE9P60153 205 aaKnown RBP15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 SF3A3Q12874 501 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 CCDC96Q2M329 555 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 TTC38Q5R3I4 469 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 RBM28Q9NW13 759 aaKnown RBP15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 XDHP47989 1333 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 B4DLN1 442 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 AMPD2Q01433 879 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 UBE3CQ15386 1083 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 CCDC40Q4G0X9 1142 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 SHISA4Q96DD7 197 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 TNKSO95271 1327 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 RCCD1A6NED2 376 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 PP2D1A8MPX8 630 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 GSG1L2A8MUP6 293 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 EIF3HO15372 352 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 PARP1P09874 1014 aaKnown RBP15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 TBC1D31Q96DN5 1066 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 AATFQ9NY61 560 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 RIPOR2Q9Y4F9 1068 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 LMO7Q8WWI1 1683 aa15.79■□□□□ 0.12
PCDHB3-201ENST00000231130 GOLGA6L7A0A1B0GV03 622 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 PRPF6O94906 941 aaKnown RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 TUBBP07437 444 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 NLRP5P59047 1200 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 AP1ARQ63HQ0 302 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 DNAJC10Q8IXB1 793 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 RASGRP4Q8TDF6 673 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 CPSF2Q9P2I0 782 aaKnown RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 PDHBP11177 359 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 VEGFAP15692 232 aaPredicted RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 CCDC70Q6NSX1 233 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 MICALCLQ6ZW33 695 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 SH2D3CQ8N5H7 860 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 SPATA5Q8NB90 893 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 CCDC51Q96ER9 411 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 C5P01031 1676 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 WDR19Q8NEZ3 1342 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 NWD2Q9ULI1 1742 aa15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 IRS4O14654 1257 aaPredicted RBP15.78■□□□□ 0.12
PCDHB3-201ENST00000231130 KRT86O43790 486 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms