RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 MCOLN1Q9GZU1 580 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 UBA5Q9GZZ9 404 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 SPATC1LQ9H0A9 340 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 PRR12Q9ULL5 1215 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 TNPO2O14787 897 aaKnown RBP16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 PLA2G6O60733 806 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 BTNL9Q6UXG8 535 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 FAM160B2Q86V87 743 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 STAG2Q8N3U4 1231 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 MB21D1Q8N884 522 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 MYL10Q9BUA6 226 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 SLC38A10Q9HBR0 1119 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 RAVER2Q9HCJ3 691 aaKnown RBP16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 ZNF214Q9UL59 606 aaPredicted RBP16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 RIPK3Q9Y572 518 aa16.86■□□□□ 0.29
SUPT4H1-201ENST00000225504 A0A0G2JMZ2 1700 aa16.85■□□□□ 0.29
SUPT4H1-201ENST00000225504 ZBED4O75132 1171 aa16.85■□□□□ 0.29
SUPT4H1-201ENST00000225504 SLC4A3P48751 1232 aa16.85■□□□□ 0.29
SUPT4H1-201ENST00000225504 TROAPQ12815 778 aa16.85■□□□□ 0.29
SUPT4H1-201ENST00000225504 CPXCR1Q8N123 301 aa16.85■□□□□ 0.29
SUPT4H1-201ENST00000225504 MTA3Q9BTC8 594 aa16.85■□□□□ 0.29
SUPT4H1-201ENST00000225504 GJD2Q9UKL4 321 aa16.85■□□□□ 0.29
SUPT4H1-201ENST00000225504 PTPN22Q9Y2R2 807 aa16.85■□□□□ 0.29
SUPT4H1-201ENST00000225504 STAT3P40763 770 aa16.84■□□□□ 0.29
SUPT4H1-201ENST00000225504 PRKCZQ05513 592 aa16.84■□□□□ 0.29
SUPT4H1-201ENST00000225504 SYDE2Q5VT97 1194 aa16.84■□□□□ 0.29
SUPT4H1-201ENST00000225504 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
SUPT4H1-201ENST00000225504 SRRDQ9UH36 339 aa16.84■□□□□ 0.29
SUPT4H1-201ENST00000225504 MAD2L2Q9UI95 211 aa16.84■□□□□ 0.29
SUPT4H1-201ENST00000225504 ZNF536O15090 1300 aa16.84■□□□□ 0.29
SUPT4H1-201ENST00000225504 PALM3A6NDB9 673 aaPredicted RBP16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 PARP1P09874 1014 aaKnown RBP16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 TAL1P17542 331 aaPredicted RBP16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 ERCC3P19447 782 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 CASTP20810 708 aaKnown RBP16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 MAPK4P31152 587 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 LIFRP42702 1097 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 CCNA1P78396 465 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 GRM4Q14833 912 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 ARHGEF6Q15052 776 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 SLC35G1Q2M3R5 365 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 WDR78Q5VTH9 848 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 CCDC174Q6PII3 467 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 BLOC1S2Q6QNY1 142 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 NFXL1Q6ZNB6 911 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 GPR142Q7Z601 462 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 NCAPG2Q86XI2 1143 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 CCAR1Q8IX12 1150 aaKnown RBP16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 ZNF654Q8IZM8 581 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 AGBL1Q96MI9 1066 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 ZSWIM6Q9HCJ5 1215 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 BRPF3Q9ULD4 1205 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 PTCH2Q9Y6C5 1203 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 WDR19Q8NEZ3 1342 aa16.83■□□□□ 0.28
SUPT4H1-201ENST00000225504 GNRH1P01148 92 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 HMGB1P09429 215 aaKnown RBP16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 RXRAP19793 462 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 RPS6KB1P23443 525 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 FLT3LGP49771 235 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 ASPRV1Q53RT3 343 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 GPATCH4Q5T3I0 446 aaKnown RBP16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 SNRNP48Q6IEG0 339 aaKnown RBP16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 Q6ZUG5 572 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 PLEKHH3Q7Z736 793 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 CATIPQ7Z7H3 387 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 NBPF11Q86T75 865 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 RIOX2Q8IUF8 465 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 TNS4Q8IZW8 715 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 TMTC2Q8N394 836 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 NUP133Q8WUM0 1156 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 COA7Q96BR5 231 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 VAT1LQ9HCJ6 419 aa16.82■□□□□ 0.28
SUPT4H1-201ENST00000225504 CCDC69A6NI79 296 aa16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 KLRF2D3W0D1 207 aa16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 ATP2A1O14983 1001 aa16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 HOXD10P28358 340 aa16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 PKN2Q16513 984 aaKnown RBP16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 FBXO46Q6PJ61 603 aaPredicted RBP16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 ADGRF4Q8IZF3 695 aa16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 SHCBP1Q8NEM2 672 aa16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 PLXNB2O15031 1838 aa16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 SMCHD1A6NHR9 2005 aa16.81■□□□□ 0.28
SUPT4H1-201ENST00000225504 PTPREP23469 700 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 PSMA5P28066 241 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 MORN1Q5T089 497 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 SGMS1Q86VZ5 419 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 USP6NLQ92738 828 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 TEX13BQ9BXU2 312 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 TM6SF1Q9BZW5 370 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 MROH8Q9H579 483 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 SLC25A27O95847 323 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 FDX1P10109 184 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 CYP2B6P20813 491 aa16.8■□□□□ 0.28
SUPT4H1-201ENST00000225504 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms