RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 NOVA2Q9UNW9 492 aaKnown RBP12.12□□□□□ -0.47
USP31-201ENST00000219689 ARID5BQ14865 1188 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 TBC1D7Q9P0N9 293 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 PLAAQ9Y263 795 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 POC1B-GALNT4F8VUJ3 575 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 C11orf57Q6ZUT1 292 aaPredicted RBP12.12□□□□□ -0.47
USP31-201ENST00000219689 TEX9Q8N6V9 391 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 GIPC1O14908 333 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 LGSNQ5TDP6 509 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 ARHGAP18Q8N392 663 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
USP31-201ENST00000219689 MSANTD4Q8NCY6 345 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 HIPK4Q8NE63 616 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
USP31-201ENST00000219689 IL16Q14005 1332 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 COBLO75128 1261 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 SNUPNO95149 360 aaKnown RBP12.11□□□□□ -0.47
USP31-201ENST00000219689 EHHADHQ08426 723 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 DDX28Q9NUL7 540 aaKnown RBP12.11□□□□□ -0.47
USP31-201ENST00000219689 DBNLQ9UJU6 430 aaKnown RBP12.11□□□□□ -0.47
USP31-201ENST00000219689 SPC25Q9HBM1 224 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 TPP2P29144 1249 aaPredicted RBP12.11□□□□□ -0.47
USP31-201ENST00000219689 KLHL30Q0D2K2 578 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 TBK1Q9UHD2 729 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 TMED2Q15363 201 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 EPC1Q9H2F5 836 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 DCTPP1Q9H773 170 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 ORC6Q9Y5N6 252 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 EPN1Q9Y6I3 576 aaPredicted RBP12.11□□□□□ -0.47
USP31-201ENST00000219689 CAVIN4Q5BKX8 364 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 NUDCD1Q96RS6 583 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 NLRP14Q86W24 1093 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 CEP19Q96LK0 163 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 RTL9Q8NET4 1388 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 HEXIM1O94992 359 aaKnown RBP12.11□□□□□ -0.47
USP31-201ENST00000219689 NDUFA8P51970 172 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 HAUS8Q9BT25 410 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 KIF20BQ96Q89 1820 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 TRMT10CQ7L0Y3 403 aaKnown RBP12.11□□□□□ -0.47
USP31-201ENST00000219689 SCYL1Q96KG9 808 aa12.11□□□□□ -0.47
USP31-201ENST00000219689 EEF1GP26641 437 aaKnown RBP12.1□□□□□ -0.47
USP31-201ENST00000219689 RASSF7Q02833 373 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 FCHSD1Q86WN1 690 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 OCA2Q04671 838 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 TDRD7Q8NHU6 1098 aaKnown RBP12.1□□□□□ -0.47
USP31-201ENST00000219689 SH2D4AQ9H788 454 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 CNNM2Q9H8M5 875 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 KRT3P12035 628 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 SV2BQ7L1I2 683 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 KIF1BO60333 1816 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 RGS9BPQ6ZS82 235 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 RFX8Q6ZV50 586 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
USP31-201ENST00000219689 TRAF3IP3Q9Y228 551 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 DIAPH2O60879 1101 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 ARIH1Q9Y4X5 557 aaPredicted RBP12.1□□□□□ -0.47
USP31-201ENST00000219689 ZNF189O75820 626 aaPredicted RBP12.1□□□□□ -0.47
USP31-201ENST00000219689 NLRC4Q9NPP4 1024 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 RAP1GDS1P52306 607 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 STRN3Q13033 797 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 MFSD4BQ5TF39 518 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 WDR78Q5VTH9 848 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 HAUS7Q99871 368 aa12.1□□□□□ -0.47
USP31-201ENST00000219689 MYO1FO00160 1098 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 PAX7P23759 505 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 CARD10Q9BWT7 1032 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 ETAA1Q9NY74 926 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 ATF2P15336 505 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 TCP1P17987 556 aaKnown RBP12.09□□□□□ -0.47
USP31-201ENST00000219689 ME3Q16798 604 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 NFU1Q9UMS0 254 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 GYG2O15488 501 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 CCNT1O60563 726 aaKnown RBP12.09□□□□□ -0.47
USP31-201ENST00000219689 TATP17735 454 aaPredicted RBP12.09□□□□□ -0.47
USP31-201ENST00000219689 DAB2P98082 770 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 DHX9Q08211 1270 aaKnown RBP12.09□□□□□ -0.47
USP31-201ENST00000219689 ICA1LQ8NDH6 482 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 STAMQ92783 540 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 CD2BP2O95400 341 aaKnown RBP12.09□□□□□ -0.47
USP31-201ENST00000219689 MMEP08473 750 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 CALML3P27482 149 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 IGBP1P78318 339 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 STK10O94804 968 aaKnown RBP12.09□□□□□ -0.47
USP31-201ENST00000219689 ARHGAP4P98171 946 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 RBL2Q08999 1139 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 UIMC1Q96RL1 719 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 PRDM4Q9UKN5 801 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 PFKFB1P16118 471 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 RNASELQ05823 741 aaKnown RBP12.09□□□□□ -0.47
USP31-201ENST00000219689 GMNCA6NCL1 334 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 STX10O60499 249 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 PLCD1P51178 756 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 CCDC125Q86Z20 511 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 RMI1Q9H9A7 625 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 ABCB4P21439 1286 aa12.09□□□□□ -0.47
USP31-201ENST00000219689 ATP8B2P98198 1209 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms