RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 SH3RF3Q8TEJ3 882 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-201ENST00000217109 PCDHA4Q9UN74 947 aa10.93□□□□□ -0.66
CSTF1-201ENST00000217109 TCRBV5S4A2TA0A5A2 114 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 FAM170AA1A519 330 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 B4DLN1 442 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 NTSR2O95665 410 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 LONP1P36776 959 aaKnown RBP10.92□□□□□ -0.66
CSTF1-201ENST00000217109 CALCRLQ16602 461 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 TAF3Q5VWG9 929 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 NYAP1Q6ZVC0 841 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 SPAG5Q96R06 1193 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 DDX41Q9UJV9 622 aaKnown RBP10.92□□□□□ -0.66
CSTF1-201ENST00000217109 PHLPP2Q6ZVD8 1323 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 H7C1D1 291 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 FOXP2O15409 715 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 TACC1O75410 805 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 OR52Z1P0C646 297 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 OAS2P29728 719 aaKnown RBP10.92□□□□□ -0.66
CSTF1-201ENST00000217109 SCNN1DP51172 638 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 TRIM14Q14142 442 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 SYCP1Q15431 976 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 INTS5Q6P9B9 1019 aaKnown RBP10.92□□□□□ -0.66
CSTF1-201ENST00000217109 FAM196AQ6ZSG2 479 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 NELFCDQ8IXH7 590 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 ANKRD7Q92527 254 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 JAKMIP2Q96AA8 810 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 EPN1Q9Y6I3 576 aaPredicted RBP10.92□□□□□ -0.66
CSTF1-201ENST00000217109 XRN1Q8IZH2 1706 aaKnown RBP10.92□□□□□ -0.66
CSTF1-201ENST00000217109 RNASE9P60153 205 aaKnown RBP10.92□□□□□ -0.66
CSTF1-201ENST00000217109 DMTNQ08495 405 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 SMC1AQ14683 1233 aaKnown RBP10.92□□□□□ -0.66
CSTF1-201ENST00000217109 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 FCHSD1Q86WN1 690 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 VGLL2Q8N8G2 317 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 HPSEQ9Y251 543 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 RGPD1P0DJD0 1748 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 CAPN2P17655 700 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 TRAPPC10P48553 1259 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 CNNM4Q6P4Q7 775 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 TXLNBQ8N3L3 684 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 NEK11Q8NG66 645 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 NSUN4Q96CB9 384 aaKnown RBP10.92□□□□□ -0.66
CSTF1-201ENST00000217109 NLRC4Q9NPP4 1024 aa10.92□□□□□ -0.66
CSTF1-201ENST00000217109 TMCO5BA8MYB1 307 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 SEMA3EO15041 775 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 KIF20AO95235 890 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 NEK8Q86SG6 692 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 C2CD5Q86YS7 1000 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 FBXL16Q8N461 479 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 ANKRD13CQ8N6S4 541 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 COA7Q96BR5 231 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 TUBGCP2Q9BSJ2 902 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 PLEKHA4Q9H4M7 779 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 ST7Q9NRC1 585 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 ADCY7P51828 1080 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 PFKFB3Q16875 520 aaPredicted RBP10.91□□□□□ -0.66
CSTF1-201ENST00000217109 ZNF658Q5TYW1 1059 aaPredicted RBP10.91□□□□□ -0.66
CSTF1-201ENST00000217109 HDXQ7Z353 690 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 NKX2-3Q8TAU0 364 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 PIGSQ96S52 555 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 PARD6BQ9BYG5 372 aa10.91□□□□□ -0.66
CSTF1-201ENST00000217109 TOPAZ1Q8N9V7 1692 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 PRCPP42785 496 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 MRPL12P52815 198 aaKnown RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 CKAP4Q07065 602 aaKnown RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 HLTFQ14527 1009 aaKnown RBP eCLIP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 DPP8Q6V1X1 898 aaPredicted RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 TBCKQ8TEA7 893 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 CCDC51Q96ER9 411 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 RBM17Q96I25 401 aaKnown RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 DOK7Q18PE1 504 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 HERC4Q5GLZ8 1057 aaPredicted RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 CT47A1Q5JQC4 288 aaPredicted RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 RRAGAQ7L523 313 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 PHF20Q9BVI0 1012 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 CDC23Q9UJX2 597 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 USP21Q9UK80 565 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 COL5A2P05997 1499 aaPredicted RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 MFAP3LO75121 409 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 PNMA6AP0CW24 399 aaPredicted RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 PLCG1P19174 1290 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 MCM3P25205 808 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 CYP27A1Q02318 531 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 TROAPQ12815 778 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 DNAJC21Q5F1R6 531 aaKnown RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 EARS2Q5JPH6 523 aaKnown RBP10.9□□□□□ -0.66
CSTF1-201ENST00000217109 C3orf67Q6ZVT6 689 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 LRRC27Q9C0I9 530 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 DISC1Q9NRI5 854 aa10.9□□□□□ -0.66
CSTF1-201ENST00000217109 ACTN4O43707 911 aaKnown RBP10.89□□□□□ -0.67
CSTF1-201ENST00000217109 DNM2P50570 870 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 TC2NQ8N9U0 490 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 ZMYND10O75800 440 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 SLC16A2P36021 539 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 LRRC41Q15345 812 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 TCP11X2Q5H9J9 407 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 CUL5Q93034 780 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 TMEM47Q9BQJ4 181 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 LZTS2Q9BRK4 669 aa10.89□□□□□ -0.67
CSTF1-201ENST00000217109 ZCCHC17Q9NP64 241 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms