RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 DTHD1Q6ZMT9 781 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 TRMT44Q8IYL2 757 aaKnown RBP9.37□□□□□ -0.91
VAMP3-201ENST00000054666 RMND1Q9NWS8 449 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 SERPINB13Q9UIV8 391 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 C10orf71Q711Q0 1435 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 M0R2N6 131 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 KIF2AO00139 706 aaPredicted RBP9.36□□□□□ -0.91
VAMP3-201ENST00000054666 CCP110O43303 1012 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 GTPBP6O43824 516 aaPredicted RBP9.36□□□□□ -0.91
VAMP3-201ENST00000054666 GTF2F1P35269 517 aaKnown RBP eCLIP9.36□□□□□ -0.91
VAMP3-201ENST00000054666 KCNJ6P48051 423 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 FMR1Q06787 632 aaKnown RBP eCLIP9.36□□□□□ -0.91
VAMP3-201ENST00000054666 NONOQ15233 471 aaKnown RBP eCLIP9.36□□□□□ -0.91
VAMP3-201ENST00000054666 PTPN14Q15678 1187 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 INF2Q27J81 1249 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 HHIPL2Q6UWX4 724 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 VSTM4Q8IW00 320 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 CERS5Q8N5B7 392 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 ZMYND12Q9H0C1 365 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 USP40Q9NVE5 1235 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 TTLL1O95922 423 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 PDHBP11177 359 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 NOVP48745 357 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 SCNN1DP51172 638 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 GABPAQ06546 454 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 E2F4Q16254 413 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 SLC35G1Q2M3R5 365 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 KLHL10Q6JEL2 608 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 ARMCX5Q6P1M9 558 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 RASGRP2Q7LDG7 609 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 PODNQ7Z5L7 613 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 LRRC47Q8N1G4 583 aaKnown RBP9.36□□□□□ -0.91
VAMP3-201ENST00000054666 DPF2Q92785 391 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 MTMR4Q9NYA4 1195 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 PAXBP1Q9Y5B6 917 aa9.36□□□□□ -0.91
VAMP3-201ENST00000054666 ESYT2A0FGR8 921 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 SMCO2A6NFE2 343 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 RRP9O43818 475 aaKnown RBP9.35□□□□□ -0.91
VAMP3-201ENST00000054666 ZNF18P17022 549 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 PRPHP41219 470 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 UBA7P41226 1012 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 ORC2Q13416 577 aaPredicted RBP9.35□□□□□ -0.91
VAMP3-201ENST00000054666 HSP90AA4PQ58FG1 418 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 CEP135Q66GS9 1140 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 MSL1Q68DK7 614 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 PDXDC2PQ6P474 469 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 C2CD5Q86YS7 1000 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 CCAR2Q8N163 923 aaKnown RBP9.35□□□□□ -0.91
VAMP3-201ENST00000054666 REXO1Q8N1G1 1221 aaKnown RBP9.35□□□□□ -0.91
VAMP3-201ENST00000054666 DISC1Q9NRI5 854 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 KCND1Q9NSA2 647 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 FRMPD2Q68DX3 1309 aaPredicted RBP9.35□□□□□ -0.91
VAMP3-201ENST00000054666 PSDA5PKW4 1024 aaPredicted RBP9.35□□□□□ -0.91
VAMP3-201ENST00000054666 USP17L5A8MUK1 530 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 H0YIN7 160 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 ADAMTS3O15072 1205 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 OR52Z1P0C646 297 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 AKR1B1P15121 316 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 SPATA1Q5VX52 437 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 MTERF4Q7Z6M4 381 aaKnown RBP9.35□□□□□ -0.91
VAMP3-201ENST00000054666 NEK8Q86SG6 692 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 AK8Q96MA6 479 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 CTAGE1Q96RT6 745 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 PIGSQ96S52 555 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 MAP7D2Q96T17 732 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 CPVLQ9H3G5 476 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 VAT1LQ9HCJ6 419 aa9.35□□□□□ -0.91
VAMP3-201ENST00000054666 DDX4Q9NQI0 724 aaKnown RBP9.35□□□□□ -0.91
VAMP3-201ENST00000054666 MPHOSPH10O00566 681 aaKnown RBP9.34□□□□□ -0.91
VAMP3-201ENST00000054666 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
VAMP3-201ENST00000054666 CCNT1O60563 726 aaKnown RBP9.34□□□□□ -0.91
VAMP3-201ENST00000054666 MYL1P05976 194 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 CASP1P29466 404 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 CRKP46108 304 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 EIF6P56537 245 aaKnown RBP9.34□□□□□ -0.91
VAMP3-201ENST00000054666 HSP90AA2PQ14568 343 aaPredicted RBP9.34□□□□□ -0.91
VAMP3-201ENST00000054666 KARSQ15046 597 aaKnown RBP9.34□□□□□ -0.91
VAMP3-201ENST00000054666 IL17AQ16552 155 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 LETM2Q2VYF4 491 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 FILIP1LQ4L180 1135 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 RRAGBQ5VZM2 374 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 SPECC1LQ69YQ0 1117 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 STYK1Q6J9G0 422 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 CDC42EP5Q6NZY7 148 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 C4orf32Q8N8J7 132 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 ANKRD20A12PQ8NF67 263 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 TRIM34Q9BYJ4 488 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 BLZF1Q9H2G9 400 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 RIOX1Q9H6W3 641 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 DBNDD1Q9H9R9 158 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 MAGEF1Q9HAY2 307 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 TRMT1Q9NXH9 659 aaKnown RBP9.34□□□□□ -0.91
VAMP3-201ENST00000054666 CTNND2Q9UQB3 1225 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 RGPD3A6NKT7 1758 aaPredicted RBP9.34□□□□□ -0.91
VAMP3-201ENST00000054666 RGPD4Q7Z3J3 1758 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 ADAMTSL1Q8N6G6 1762 aa9.34□□□□□ -0.91
VAMP3-201ENST00000054666 IGKV6D-41A0A0C4DH26 115 aa9.33□□□□□ -0.92
VAMP3-201ENST00000054666 USP27XA6NNY8 438 aa9.33□□□□□ -0.92
VAMP3-201ENST00000054666 TMEM232C9JQI7 657 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms