RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 FAM178BQ8IXR5 827 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
RGPD5-201ENST00000016946 DYNLL2Q96FJ2 89 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 CAPZA3Q96KX2 299 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 PRIMPOLQ96LW4 560 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 JPH2Q9BR39 696 aaPredicted RBP12.3□□□□□ -0.44
RGPD5-201ENST00000016946 RNF181Q9P0P0 153 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 TET3O43151 1660 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 DAPK3O43293 454 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 SASH1O94885 1247 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 BRD1O95696 1058 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 NT5C2P49902 561 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 POLGP54098 1239 aaPredicted RBP12.3□□□□□ -0.44
RGPD5-201ENST00000016946 TMED8Q6PL24 325 aaPredicted RBP12.3□□□□□ -0.44
RGPD5-201ENST00000016946 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 CSRNP2Q9H175 543 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 AGTPBP1Q9UPW5 1226 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 ZNF521Q96K83 1311 aa12.3□□□□□ -0.44
RGPD5-201ENST00000016946 XRCC6P12956 609 aaKnown RBP eCLIP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 RSPH3Q86UC2 560 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 ZHX1Q9UKY1 873 aaPredicted RBP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 MINPP1Q9UNW1 487 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 K7ENM7 598 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 STAT2P52630 851 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 CYP4A11Q02928 519 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 CCDC14Q49A88 953 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 FAM160B2Q86V87 743 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 FBXO18Q8NFZ0 1043 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 CDHR1Q96JP9 859 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 MTRF1LQ9UGC7 380 aaKnown RBP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 GNA14O95837 355 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 PFKFB1P16118 471 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 TBC1D10BQ4KMP7 808 aaPredicted RBP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 ZNF589Q86UQ0 364 aaPredicted RBP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 FAM193BQ96PV7 902 aaPredicted RBP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 PIGSQ96S52 555 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 BRIP1Q9BX63 1249 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 CD209Q9NNX6 404 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 CYP2J2P51589 502 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 UBXN2AP68543 259 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 BMS1Q14692 1282 aaKnown RBP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 CCDC114Q96M63 670 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 TFDP1Q14186 410 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 ECE2O60344 883 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 ATF7P17544 494 aaPredicted RBP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 MKRN3Q13064 507 aaKnown RBP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 NFIXQ14938 502 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 LRCH2Q5VUJ6 765 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 IPO4Q8TEX9 1081 aaKnown RBP12.29□□□□□ -0.44
RGPD5-201ENST00000016946 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
RGPD5-201ENST00000016946 LRRIQ4A6NIV6 560 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 SLC7A3Q8WY07 619 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 NDC80O14777 642 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 XRCC5P13010 732 aaKnown RBP12.28□□□□□ -0.44
RGPD5-201ENST00000016946 TRAPPC10P48553 1259 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 CYP26C1Q6V0L0 522 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 PROCA1Q8NCQ7 364 aaPredicted RBP12.28□□□□□ -0.44
RGPD5-201ENST00000016946 NAP1L3Q99457 506 aaPredicted RBP12.28□□□□□ -0.44
RGPD5-201ENST00000016946 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 CRKP46108 304 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 KLHL30Q0D2K2 578 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 SYDE2Q5VT97 1194 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 SPECC1LQ69YQ0 1117 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 ZKSCAN5Q9Y2L8 839 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 TNNC2P02585 160 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 PPP2R5AQ15172 486 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 TMEM179Q6ZVK1 233 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 PLEKHG2Q9H7P9 1386 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 GAS8O95995 478 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 GCFC2P16383 781 aaKnown RBP12.28□□□□□ -0.44
RGPD5-201ENST00000016946 FAM26FQ5R3K3 315 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.28□□□□□ -0.44
RGPD5-201ENST00000016946 RTEL1Q9NZ71 1219 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 POLR3GO15318 223 aaPredicted RBP12.28□□□□□ -0.44
RGPD5-201ENST00000016946 EPHA10Q5JZY3 1008 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 PCDHA4Q9UN74 947 aa12.28□□□□□ -0.44
RGPD5-201ENST00000016946 PSDA5PKW4 1024 aaPredicted RBP12.27□□□□□ -0.44
RGPD5-201ENST00000016946 LONP1P36776 959 aaKnown RBP12.27□□□□□ -0.44
RGPD5-201ENST00000016946 DMP1Q13316 513 aaPredicted RBP12.27□□□□□ -0.44
RGPD5-201ENST00000016946 SYNE4Q8N205 404 aa12.27□□□□□ -0.44
RGPD5-201ENST00000016946 WDR11Q9BZH6 1224 aa12.27□□□□□ -0.44
RGPD5-201ENST00000016946 STMN4Q9H169 189 aaPredicted RBP12.27□□□□□ -0.44
RGPD5-201ENST00000016946 TULP4Q9NRJ4 1543 aa12.27□□□□□ -0.44
RGPD5-201ENST00000016946 RPAP1Q9BWH6 1393 aaPredicted RBP12.27□□□□□ -0.44
RGPD5-201ENST00000016946 CDK8P49336 464 aa12.27□□□□□ -0.44
RGPD5-201ENST00000016946 ADCK5Q3MIX3 580 aa12.27□□□□□ -0.44
RGPD5-201ENST00000016946 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.27□□□□□ -0.44
RGPD5-201ENST00000016946 ZNF577Q9BSK1 485 aa12.27□□□□□ -0.44
RGPD5-201ENST00000016946 ADCY10Q96PN6 1610 aa12.27□□□□□ -0.45
RGPD5-201ENST00000016946 ERCC5P28715 1186 aaPredicted RBP12.27□□□□□ -0.45
RGPD5-201ENST00000016946 CACNB3P54284 484 aa12.27□□□□□ -0.45
RGPD5-201ENST00000016946 SOS2Q07890 1332 aaPredicted RBP12.27□□□□□ -0.45
RGPD5-201ENST00000016946 MAGEA1P43355 309 aa12.27□□□□□ -0.45
RGPD5-201ENST00000016946 PTGDRQ13258 359 aa12.27□□□□□ -0.45
RGPD5-201ENST00000016946 TRMT44Q8IYL2 757 aaKnown RBP12.27□□□□□ -0.45
RGPD5-201ENST00000016946 NUCKS1Q9H1E3 243 aaKnown RBP12.27□□□□□ -0.45
RGPD5-201ENST00000016946 ARMCX3Q9UH62 379 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms