RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Copb2O55029 905 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ddx49Q4FZF3 480 aaKnown RBP13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Sar1bQ9CQC9 198 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ccnyl1D3YUJ3 367 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Cfap70D3YVL2 1141 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Kpna2P52293 529 aaKnown RBP13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 4933409G03RikQ8C5U0 320 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Osbpl5Q9ER64 874 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Cpsf3Q9QXK7 684 aa13.7□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gm15262A0A140LIQ5 728 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Tuft1O08970 390 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Clec11aO88200 328 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Myo1fP70248 1099 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Rnf40Q3U319 1001 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ces1dQ8VCT4 565 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Asxl2Q8BZ32 1370 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Erich2E9Q1A6 463 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Cyp26a1O55127 497 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Pde4aO89084 844 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ccdc85aQ5SP85 500 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ttc1Q91Z38 292 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Prpsap1Q9D0M1 356 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Itsn2Q9Z0R6 1659 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Pard3Q99NH2 1333 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Med23Q80YQ2 1367 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Agap2Q3UHD9 1186 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ppp2r5aQ6PD03 486 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ctnna1P26231 906 aaKnown RBP13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Nhej1Q3KNJ2 295 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gngt1Q61012 74 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Fbxo11Q7TPD1 930 aaKnown RBP13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Pank4Q80YV4 820 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Palm2Q8BR92 376 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Slain2Q8CI08 581 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Slc12a6Q924N4 1150 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Smc6Q924W5 1097 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Dach1Q9QYB2 751 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 AceP09470 1312 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 DgkiD3YWQ0 1071 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Fam178bQ24JP3 464 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gnl3Q8CI11 538 aaKnown RBP13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Prc1Q99K43 603 aaKnown RBP13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Setd1bQ8CFT2 1985 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Trappc10Q3TLI0 1259 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Swap70Q6A028 585 aaKnown RBP13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Trim17Q7TPM3 477 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Eno4Q8C042 619 aa13.69□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Rsph10bE9PYQ0 876 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Atp6v1e1P50518 226 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 MpndQ3TV65 487 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Cd248Q91V98 765 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Zcchc8Q9CYA6 709 aaKnown RBP13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 NpatQ8BMA5 1420 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Tnip3A0A1D5RMN0 279 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Wdr93Q402B2 695 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Snx19Q6P4T1 997 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Dnaaf1Q9D2H9 634 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Sf3a3Q9D554 501 aaKnown RBP13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 AU022751B1B0V2 589 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Hspa8P63017 646 aaKnown RBP13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 1700020D05RikQ99PB1 294 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Them5Q9CQJ0 248 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 AticQ9CWJ9 592 aaKnown RBP13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Pdzd9Q9D9M4 266 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ssh2Q5SW75 1423 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Sgk1Q9WVC6 431 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Tfdp1Q08639 410 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gins2Q9D600 185 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 CsadQ9DBE0 493 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gna15P30678 374 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Rps8P62242 208 aaKnown RBP13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Sik1Q60670 779 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ccdc92Q8VDN4 314 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Cdk5rap3Q99LM2 503 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Cdk13Q69ZA1 1511 aaKnown RBP13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Efcab6Q6P1E8 1516 aa13.68□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Vmn2r68L7N2B3 851 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 PcQ05920 1178 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Dcaf15Q6PFH3 600 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Q8BZJ8 459 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gdf11Q9Z1W4 405 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Calb1P12658 261 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Rasgrf1P27671 1262 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Fkbp3Q62446 224 aaKnown RBP13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Edc3Q8K2D3 508 aaKnown RBP13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gimap7Q8R379 293 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Spdl1Q923A2 608 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Hspa1lP16627 641 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Gngt2Q61017 69 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ccdc153P0C7Q1 202 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Trip13Q3UA06 432 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ppp1r1bQ60829 194 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 E4f1Q8CCE9 783 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Ube3bQ9ES34 1070 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Map3k19E9Q3S4 1311 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Xpo4Q9ESJ0 1151 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Tnfrsf10bQ9QZM4 381 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Eddm13E9Q7F5 164 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Sycp3P70281 254 aa13.67□□□□□ -0.22
Col6a3-208ENSMUST00000188587 Arhgap18Q8K0Q5 663 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms