RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Ift122Q6NWV3 1182 aa12.28□□□□□ -0.44
Lig3-212ENSMUST00000173727 Ube2oQ6ZPJ3 1288 aa12.28□□□□□ -0.44
Lig3-212ENSMUST00000173727 Apobec3Q99J72 440 aaKnown RBP12.28□□□□□ -0.44
Lig3-212ENSMUST00000173727 Lmbr1Q9JIT0 490 aa12.28□□□□□ -0.44
Lig3-212ENSMUST00000173727 EzrP26040 586 aaKnown RBP12.27□□□□□ -0.44
Lig3-212ENSMUST00000173727 Grin1P35438 938 aa12.27□□□□□ -0.44
Lig3-212ENSMUST00000173727 CtshP49935 333 aa12.27□□□□□ -0.44
Lig3-212ENSMUST00000173727 Gcnt1Q09324 428 aa12.27□□□□□ -0.44
Lig3-212ENSMUST00000173727 Gjd4Q8BSD4 364 aa12.27□□□□□ -0.44
Lig3-212ENSMUST00000173727 Trappc12Q8K2L8 797 aa12.27□□□□□ -0.44
Lig3-212ENSMUST00000173727 FktnQ8R507 461 aa12.27□□□□□ -0.44
Lig3-212ENSMUST00000173727 Fam205a1D3YZF6 1314 aa12.27□□□□□ -0.45
Lig3-212ENSMUST00000173727 Gm43738A0A0G2JEA5 862 aa12.27□□□□□ -0.45
Lig3-212ENSMUST00000173727 Zscan29E9Q5B4 869 aa12.27□□□□□ -0.45
Lig3-212ENSMUST00000173727 Mmp14P53690 582 aa12.27□□□□□ -0.45
Lig3-212ENSMUST00000173727 Tmem60Q8K174 133 aa12.27□□□□□ -0.45
Lig3-212ENSMUST00000173727 Vps16Q920Q4 839 aa12.27□□□□□ -0.45
Lig3-212ENSMUST00000173727 Calml3Q9D6P8 149 aa12.27□□□□□ -0.45
Lig3-212ENSMUST00000173727 Nr2e3Q9QXZ7 395 aa12.27□□□□□ -0.45
Lig3-212ENSMUST00000173727 Kcnh3Q9WVJ0 1095 aa12.27□□□□□ -0.45
Lig3-212ENSMUST00000173727 Tbc1d2B1AVH7 922 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 En2P09066 324 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Gdf10P97737 476 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Arhgef16Q3U5C8 713 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Plekha7Q3UIL6 1118 aaKnown RBP12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Lgr6Q3UVD5 967 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 C87499Q3UX49 493 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Prl2c1Q5SVL9 228 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Adgrg6Q6F3F9 1165 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Slc9c1Q6UJY2 1175 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Lrrd1Q8C0R9 853 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Ttc27Q8CD92 847 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Rnaseh2aQ9CWY8 301 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Acot3Q9QYR7 432 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 NinQ61043 2035 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Gm973E9Q295 1059 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Ubxn2bQ0KL01 331 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Ms4a5Q810P8 197 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Dlg1Q811D0 905 aaKnown RBP12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Txnrd2Q9JLT4 524 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Nlrp5Q9R1M5 1163 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Card6E9PWH2 1175 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Akap4Q60662 849 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Psen2Q61144 448 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Csrnp2Q8BGQ2 534 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Gpcpd1Q8C0L9 675 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Lman1lQ8VCD3 505 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 Prkab1Q9R078 270 aa12.26□□□□□ -0.45
Lig3-212ENSMUST00000173727 NynrinQ5DTZ0 1840 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Eif5P59325 429 aaKnown RBP12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Swap70Q6A028 585 aaKnown RBP12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Gpsm2Q8VDU0 679 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Ppil2Q9D787 521 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Tmem132bF7BAB2 1078 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Cyp2c68K7N6C2 491 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Oxr1Q4KMM3 866 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Hs2st1Q8R3H7 356 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Nrbp1Q99J45 535 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 GrapQ9CX99 217 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Wdr64Q9D565 1086 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Tmem191cQ9JJB1 302 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Irx4Q9QY61 515 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Cacna1fQ9JIS7 1985 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Zfp853A0A1D5RM95 733 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Stx1aO35526 288 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Ccdc162pQ0VG85 912 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 PigsQ6PD26 555 aaKnown RBP12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Shtn1Q8K2Q9 631 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Stxbp4Q9WV89 557 aa12.25□□□□□ -0.45
Lig3-212ENSMUST00000173727 Aco1P28271 889 aaKnown RBP12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Stxbp2Q64324 593 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Ano6Q6P9J9 911 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Cep120Q7TSG1 988 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Sycp2lA0A0M3U1B0 842 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Zc3h15Q3TIV5 426 aaKnown RBP12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Cep85Q8BMK0 761 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Onecut3Q8K557 490 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Btn2a2A4QPC6 514 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Kiaa1468Q148V7 1216 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Olfr119Q7TRJ5 321 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Ctdspl2Q8BG15 465 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Gmcl1Q920G9 524 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Frmpd4A2AFR3 1320 aa12.24□□□□□ -0.45
Lig3-212ENSMUST00000173727 Tspoap1Q7TNF8 1846 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Atrnl1Q6A051 1378 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Zkscan7E9PVW1 718 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Nucb2P81117 420 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Pex1Q5BL07 1284 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Tshz1Q5DTH5 1084 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Vmn1r209Q5NC97 312 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 BC048507Q80ZS7 89 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Scfd2Q8BTY8 684 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Vps53Q8CCB4 832 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Snapc2Q91XA5 359 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Polr2dQ9D7M8 142 aaKnown RBP12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 ArcQ9WV31 396 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Magea1O89006 320 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Magea5O89009 320 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 CfhP06909 1234 aa12.23□□□□□ -0.45
Lig3-212ENSMUST00000173727 Cdh15P33146 784 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms