RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Gm5169Q5M8P2 212 aa16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Ncoa4Q5U4H9 625 aa16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Rabep2Q91WG2 554 aa16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Sh2b1Q91ZM2 756 aa16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 CenpkQ9ESN5 271 aa16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Cnbd1B1AWM0 430 aa16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Gna15P30678 374 aa16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Rgl1Q60695 768 aa16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Zbed4Q80WQ9 1168 aa16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Srp68Q8BMA6 625 aaKnown RBP16.68■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Uhrf1bp1lA2RSJ4 1457 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Cd72P21855 354 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Anks6Q6GQX6 883 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Pank4Q80YV4 820 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 AsphQ8BSY0 741 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Q3TTJ4 293 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Foxd4Q60688 444 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Atp2a3Q64518 1038 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Rd3Q8BRE0 195 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Polr2bQ8CFI7 1174 aaKnown RBP16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Lonp1Q8CGK3 949 aaKnown RBP16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Med23Q80YQ2 1367 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Pde8bE9Q4S1 865 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Xrcc5P27641 732 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Tlr7P58681 1050 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 DgkiD3YWQ0 1071 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Clec11aO88200 328 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Tph1P17532 447 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Ppp2r5aQ6PD03 486 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 RubcnQ80U62 956 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 FosP01101 380 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Dynll1P63168 89 aa16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 CtcfQ61164 736 aaKnown RBP16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Myef2Q8C854 591 aaKnown RBP16.67■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 UrgcpQ5NCI0 926 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Ciapin1Q8WTY4 309 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Prc1Q99K43 603 aaKnown RBP16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Fen1P39749 378 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Trip13Q3UA06 432 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Arhgef40Q3UPH7 1517 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Gpr182P43142 395 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Samhd1Q60710 627 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Krt32Q62168 407 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Rusc2Q80U22 1514 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Spata17Q9D552 379 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 PalmdQ9JHU2 551 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Gm6657A0A1B0GRJ3 277 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Cdr1E9Q0B4 517 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 GssP51855 474 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Mysm1Q69Z66 819 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Krt8P11679 490 aaKnown RBP16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Agbl1Q09M05 972 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Drc1Q3USS3 753 aa16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 SarnpQ9D1J3 210 aaKnown RBP16.66■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Hspd1P63038 573 aaKnown RBP16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Myo1fP70248 1099 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Ccdc162pQ0VG85 912 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Vps37bQ8R0J7 285 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 1700020D05RikQ99PB1 294 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Bcs1lQ9CZP5 418 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Gja10Q9WUS4 505 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Tm6sf1P58749 370 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Gm3414Q3TNU4 584 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 D130040H23RikQ8BII3 405 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Iqcb1Q8BP00 598 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 SelenovD3YXG1 328 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Mnat1P51949 309 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Nod1Q8BHB0 953 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 6820408C15RikQ8BJX2 354 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Tbc1d23Q8K0F1 684 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Tnfrsf10bQ9QZM4 381 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Plxnc1Q9QZC2 1574 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Lamc2Q61092 1191 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Kctd10Q922M3 315 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Pex3Q9QXY9 372 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Kdm3bQ6ZPY7 1562 aa16.65■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 ZfxP17012 799 aa16.64■□□□□ 0.26
Ccdc50-203ENSMUST00000100026 Fam167bP17257 162 aa16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Cep63Q3UPP8 700 aa16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Zfp397Q7TNK4 527 aa16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Sdad1Q80UZ2 687 aaKnown RBP16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Prune1Q8BIW1 454 aa16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Erbb4Q61527 1308 aa16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Ercc5P35689 1170 aa16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Arhgap24Q8C4V1 747 aa16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Znf568E9PYI1 671 aa16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Chmp2aQ9DB34 222 aa16.64■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Erich3F6QRE9 1637 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Ncoa7Q6DFV7 943 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Apbb1ipQ8R5A3 670 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Pstpip2Q99M15 334 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Dhx37Q6NZL1 1150 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Cspg5Q71M36 566 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Asap2Q7SIG6 958 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Micall1Q8BGT6 870 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Plcg1Q62077 1302 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Stk10O55098 966 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Frat1P70339 274 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 IqceQ6PCQ0 778 aa16.63■□□□□ 0.25
Ccdc50-203ENSMUST00000100026 Taf5lQ91WQ5 589 aa16.63■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms