RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Usp33Q8R5K2 909 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 CrebzfQ91ZR3 358 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 EpgnQ924X1 152 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Dnajc5bQ9CQ94 199 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Golga1Q9CW79 758 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Fip1l1Q9D824 581 aaKnown RBP10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Wdr46Q9Z0H1 622 aaKnown RBP10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Nckap5lQ6GQX2 1323 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 FancaQ9JL70 1439 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Gm4985A2ALC6 410 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Fam47eD3YWC7 402 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ccdc144bE9PVZ3 520 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Speer4aF8VPX6 267 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ube3aO08759 870 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ppfibp2O35711 882 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ercc5P35689 1170 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Dnm1P39053 867 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 CcnjlQ5SRT8 387 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Klra8Q60682 266 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Sema4bQ62179 823 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 GopcQ8BH60 463 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Maip1Q8BHE8 291 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Cpsf7Q8BTV2 471 aaKnown RBP10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Unc45aQ99KD5 944 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Slc52a2Q9D8F3 450 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Baiap2l1Q9DBJ3 514 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Mst1rQ62190 1378 aa10.77□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Sik3Q6P4S6 1311 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Kif1aP33173 1695 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tex13c2A0A0G2JGA3 530 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gna14P30677 355 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ccdc42Q5SV66 316 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ddx3yQ62095 658 aaKnown RBP10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Rps6kc1Q8BLK9 1056 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Cfap57Q9D180 1249 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Znf394Q9Z1D9 521 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 GakQ99KY4 1305 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 NhsB1AV60 1647 aa10.77□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 1700019A02RikA0A087WPV9 146 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Atp8b5A3FIN4 1183 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gm20425E9Q035 978 aaKnown RBP10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Hmgb1P63158 215 aaKnown RBP10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gm1604bQ3TRG0 118 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ltv1Q6NSQ7 470 aaKnown RBP10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Lca5Q80ST9 704 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 MtrrQ8C1A3 696 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 LzicQ8K3C3 190 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Stap2Q8R0L1 411 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Fgd4Q91ZT5 766 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Eps8l2Q99K30 729 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Krt23Q99PS0 422 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ercc6l2Q9JIM3 1537 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Serpinb6eI7HJI3 429 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 StrnO55106 780 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 JrkQ60976 557 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Xlr3cQ61806 226 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Nxf7Q80SZ6 620 aaKnown RBP10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 RalylQ8BTF8 293 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Rufy2Q8R4C2 606 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Pcdha7Q91Y13 937 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tubgcp2Q921G8 905 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Styxl1Q9DAR2 321 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Atp6v1c1Q9Z1G3 382 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Cdc45Q9Z1X9 566 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Wdr19Q3UGF1 1341 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gm6685D3YYP3 228 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tpp1O89023 562 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ift20Q61025 132 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Inpp4bQ6P1Y8 924 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Kif1bpQ6ZPU9 617 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 GptQ8QZR5 496 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 GcshQ91WK5 170 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Pcdhga10Q91XY9 930 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Syce1Q9D495 329 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tex9Q9D845 387 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Phf2Q9WTU0 1096 aa10.76□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Kdm6aO70546 1401 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 PzpQ61838 1495 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Pnpla6Q3TRM4 1355 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Irgm2A0A140LIF8 407 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Zfand4D3Z3C6 739 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Atp8a1P70704 1164 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Drc1Q3USS3 753 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Garnl3Q3V0G7 1038 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Znf652Q5DU09 608 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ecm2Q5FW85 670 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Psd2Q6P1I6 770 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Pcdhb14Q6PB90 796 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tbc1d5Q80XQ2 815 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 BoraQ8BS90 525 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Washc5Q8C2E7 1159 aaKnown RBP10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tbrg4Q91YM4 630 aaKnown RBP10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Rnf112Q96DY5 654 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tmem39aQ9CYC3 486 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Yeats2Q3TUF7 1407 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Sall1Q9ER74 1322 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Pabpc1lA2A5N3 607 aaKnown RBP10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Nfxl1E9Q8I7 918 aaKnown RBP10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ctnnal1O88327 731 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gap43P06837 227 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms