RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Hdac1O09106 482 aaKnown RBP28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 Pla2g6P97819 807 aa28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 Utp18Q5SSI6 552 aaKnown RBP28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 Churc1Q6DG52 112 aa28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 PigsQ6PD26 555 aaKnown RBP28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 Galnt17Q7TT15 598 aa28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 Tpcn2Q8BWC0 731 aa28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 Gpcpd1Q8C0L9 675 aa28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 Tubb6Q922F4 447 aa28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 Ubiad1Q9DC60 336 aa28.52■■■□□ 2.16
Cpsf4-201ENSMUST00000070487 Parp2O88554 559 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 EvcP57680 1005 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Depdc1aQ8CIG0 804 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Ivns1abpQ920Q8 642 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Ctu1Q99J10 420 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Rcan1Q9JHG6 198 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Sh2b2Q9JID9 621 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Ifi202Q9R002 445 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 IkQ9Z1M8 557 aaKnown RBP28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Dnai2A2AC93 623 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Ppef2O35385 757 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Clul1Q3ZRW6 464 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Brd2Q7JJ13 798 aaKnown RBP28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Lrrc15Q80X72 579 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Triml1Q8BVP1 470 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Epha10Q8BYG9 1007 aa28.51■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 PatjQ63ZW7 1834 aa28.5■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 PhipQ8VDD9 1821 aaKnown RBP28.5■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Gm15262A0A140LIQ5 728 aa28.5■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Fam71e1A1L3C1 212 aa28.5■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 CatspereP0DP43 985 aa28.5■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Ecm1Q61508 559 aa28.5■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Mboat4P0C7A3 435 aa28.49■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 1700006A11RikB9EHI3 544 aa28.48■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Dnajb6O54946 365 aa28.48■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Stk11ipQ3TAA7 1072 aa28.48■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Fsd1Q7TPM6 496 aa28.48■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Ppp1r10Q80W00 888 aaKnown RBP28.48■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Ubac1Q8VDI7 409 aa28.48■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Fbxo11Q7TPD1 930 aaKnown RBP28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 GlmnQ8BZM1 596 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 SltmQ8CH25 1031 aaKnown RBP28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Gpaa1Q9WTK3 621 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Homer1Q9Z2Y3 366 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 A0A1Y7VML8 143 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Cst8P32766 142 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Cct2P80314 535 aaKnown RBP28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Grm1P97772 1199 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 1700010I14RikQ7TPG0 532 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Tbc1d5Q80XQ2 815 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Kcnc4Q8R1C0 628 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Rufy3Q9D394 469 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Spint1Q9R097 507 aa28.47■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Sbf1Q6ZPE2 1867 aa28.46■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Ankrd35E9Q9D8 996 aa28.46■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Nf2P46662 596 aa28.46■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Vps37dQ810I0 261 aa28.46■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Amer2Q8CCJ4 672 aa28.46■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Rufy2Q8R4C2 606 aa28.46■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Zgrf1Q0VGT4 1863 aa28.45■■■□□ 2.15
Cpsf4-201ENSMUST00000070487 Babam1Q3UI43 333 aa28.45■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Arhgef2Q60875 985 aa28.45■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Rtn1Q8K0T0 780 aa28.45■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Rad51bO35719 350 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Hmgcs2P54869 508 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 PrkczQ02956 592 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Cep63Q3UPP8 700 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Usp17leQ7M764 540 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Rnf208Q8K0W3 265 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Nek9Q8K1R7 984 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Tmc1Q8R4P5 757 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Pbx4Q99NE9 378 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Ccdc7Q9D541 371 aa28.44■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Dpp9Q8BVG4 862 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Cdan1Q8CC12 1239 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Slc5a5Q99PN0 618 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Serpinb3bQ9D1Q5 387 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Cdc45Q9Z1X9 566 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Smarce1O54941 411 aaKnown RBP28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Stat1P42225 749 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Foxp1P58462 705 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Stim2P83093 746 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Fam155aQ8CCS2 467 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Trim32Q8CH72 655 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Bclaf1Q8K019 919 aaKnown RBP28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 KinQ8K339 391 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 RnpepQ8VCT3 650 aaKnown RBP28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Dnajc17Q91WT4 303 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Cep89Q9CZX2 791 aa28.43■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 C87977A2A958 498 aa28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Cfap52Q5F201 620 aa28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Zfp90Q61967 636 aa28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Fbxo10Q7TQF2 950 aa28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Iws1Q8C1D8 766 aa28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Stard7Q8R1R3 373 aa28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 NkapQ9D0F4 415 aaKnown RBP28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Chmp4cQ9D7F7 232 aa28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Mxra8Q9DBV4 442 aa28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Eif4enif1Q9EST3 983 aaKnown RBP28.42■■■□□ 2.14
Cpsf4-201ENSMUST00000070487 Arih1Q9Z1K5 555 aa28.42■■■□□ 2.14
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms